AutismKB 2.0

Annotation Detail for CNOT4


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Basic Information Top
Gene Symbol:CNOT4 ( CLONE243,NOT4,NOT4H )
Gene Full Name: CCR4-NOT transcription complex, subunit 4
Band: 7q33
Quick LinksEntrez ID:4850; OMIM: 604911; Uniprot ID:CNOT4_HUMAN; ENSEMBL ID: ENSG00000080802; HGNC ID: 7880
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
71Phosphoserine.
324Phosphoserine.
432Phosphoserine.
490Phosphoserine.
Location(AA) Modifications Resource
301PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
38S-palmitoylHMM predict
41S-palmitoylHMM predict
56S-palmitoylHMM predict
67Phosphotyrosine(Syk)HMM predict
145N-linkedHMM predict
152Phosphoserine(ATM)HMM predict
152O-linkedHMM predict
156O-linkedHMM predict
267Phosphothreonine(MAPK)HMM predict
267Phosphothreonine(CDK)HMM predict
284Phosphoserine(CK1)HMM predict
295Phosphoserine(IKK)HMM predict
299PhosphothreonineHMM predict
299Phosphothreonine(MAPK)HMM predict
299O-linkedHMM predict
301Phosphoserine(MAPK)HMM predict
301O-linkedHMM predict
301Phosphoserine(ATM)HMM predict
316O-linkedHMM predict
319N-linkedHMM predict
333Phosphoserine(ATM)HMM predict
357Phosphoserine(CDC2)HMM predict
361O-linkedHMM predict
362O-linkedHMM predict
378O-linkedHMM predict
384Phosphoserine(CK1)HMM predict
424Phosphoserine(CK1)HMM predict
430O-linkedHMM predict
432Phosphoserine(ATM)HMM predict
432Phosphoserine(CDC2)HMM predict
432Phosphoserine(MAPK)HMM predict
434O-linkedHMM predict
438N-linkedHMM predict
443O-linkedHMM predict
445O-linkedHMM predict
466N-linkedHMM predict
512N-linkedHMM predict
516N-linkedHMM predict
520N-linkedHMM predict
522N-linkedHMM predict
550Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001008225
  • Location:chr7 134723303-134845390
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 134847446 134847749 303 2207
CTCF CD4SISSRdata 134847446 134847749 303 2207
CTCF G2GSE9613 134845263 134845723 460 103
E2F4 G0GSE7516 134845337 134846337 1000 447
H3K4me2 HCT116GSE10453 134845928 134846510 582 829
H3K4me3 colorectalcancer 134845964 134846585 621 884
LIN9 G0GSE7516 134845450 134846337 887 503
LIN9 SGSE7516 134845572 134846510 938 651
Myc K562GSE19551 134852457 134852862 405 7269
Rb QuiescentGSE19898 134845674 134845936 262 415
TFAP2C MCF7GSE21234 134855785 134856498 713 10751
USF1 HepG2E 134845404 134846470 1066 547
hScc1 BcellGSE12603 134846000 134846510 510 865
p130 QuiescentGSE19898 134845463 134845952 489 317
p130 SenescentGSE19898 134845235 134846230 995 342
p130 shRbSenescentGSE19898 134845735 134846213 478 584
p130 G0GSE7516 134845263 134846263 1000 373
p130 SGSE7516 134845723 134846408 685 675
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 134807464 134808250 786 0
CTCF G2GSE9613 134750230 134750482 252 0
ER E2-MCF7GSE14664 134818163 134818251 88 0
ETS1 JurkatGSE17954 134844505 134846073 1568 0
H3K4me2 HCT116GSE10453 134844112 134844751 639 0
H3K4me3 colorectalcancer 134844000 134844911 911 0
H3ac HepG2E 134843704 134845196 1492 0
NRSF JurkatGSE13047 134776741 134777534 793 0
NRSF JurkatSISSRdata 134777161 134777368 207 0
NRSF mAbJurkat 134769068 134769236 168 0
NRSF mAbJurkat 134776259 134777477 1218 0
NRSF-mono JurkatQuESTdata 134776885 134777520 635 0
NRSF-poly JurkatQuESTdata 134777053 134777440 387 0
Oct1 H2O2-HelaGSE14283 134811962 134811991 29 0
Oct1 H2O2-HelaGSE14283 134833896 134833925 29 0
Oct1 HelaGSE14283 134727623 134727651 28 0
Oct1 HelaGSE14283 134781658 134781696 38 0
Oct1 HelaGSE14283 134809545 134809576 31 0
PHF8 293TGSE20725 134844607 134846164 1557 0
TAF HelaGSE8489 134844041 134844826 785 0
hScc1 BcellGSE12603 134845052 134845368 316 0
p130 QuiescentGSE19898 134845249 134845395 146 0
p130 shRbQuiescentGSE19898 134844733 134846017 1284 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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