Annotation Detail for NPTX2
Basic Information Top
| Gene Symbol: | NPTX2 ( NARP,NP-II,NP2 ) |
|---|---|
| Gene Full Name: | neuronal pentraxin II |
| Band: | 7q22.1 |
| Quick Links | Entrez ID:4885; OMIM: 600750; Uniprot ID:NPTX2_HUMAN; ENSEMBL ID: ENSG00000106236; HGNC ID: 7953 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 148 | N-linked (GlcNAc...) (Potential). | |
| 189 | N-linked (GlcNAc...) (Potential). | |
| 393 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 148 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 189 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 393 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 133 | Phosphothreonine(PKC) | HMM predict |
| 140 | Phosphoserine(CK1) | HMM predict |
| 148 | N-linked | HMM predict |
| 151 | N-linked | HMM predict |
| 185 | Phosphoserine(CK1) | HMM predict |
| 189 | N-linked | HMM predict |
| 192 | Phosphoserine(CK1) | HMM predict |
| 217 | Phosphoserine(PKB) | HMM predict |
| 261 | Phosphoserine(CDC2) | HMM predict |
- RefSeq ID: NM_002523
- Location:chr7 98084544-98097113
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 98083980 | 98085067 | 1087 | 21 |
| NRSF | Jurkat | GSE13047 | 98080483 | 98081829 | 1346 | 3389 |
| NRSF | mAb | Jurkat | 98075556 | 98078355 | 2799 | 7589 |
| NRSF | mAb | Jurkat | 98078858 | 98079297 | 439 | 5467 |
| NRSF | mAb | Jurkat | 98079605 | 98081820 | 2215 | 3832 |
| NRSF | mAb | Jurkat | 98082298 | 98083653 | 1355 | 1569 |
| NRSF-mono | Jurkat | QuESTdata | 98080742 | 98081802 | 1060 | 3273 |
| NRSF | pAb | Jurkat | 98078858 | 98079297 | 439 | 5467 |
| NRSF | pAb | Jurkat | 98079856 | 98080294 | 438 | 4470 |
| NRSF | pAb | Jurkat | 98080906 | 98081765 | 859 | 3209 |
| NRSF | pAb | Jurkat | 98082298 | 98082511 | 213 | 2140 |
| NRSF-poly | Jurkat | QuESTdata | 98080591 | 98081829 | 1238 | 3335 |
| Oct1 | Hela | GSE14283 | 98065644 | 98065702 | 58 | 18872 |
| Oct1 | Hela | GSE14283 | 98065724 | 98065773 | 49 | 18796 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 98106325 | 98106566 | 241 | 9332 |
| CTCF | G2 | GSE9613 | 98109041 | 98109486 | 445 | 12150 |
| CTCF | G2 | GSE9613 | 98113395 | 98113582 | 187 | 16375 |
| Nanog | hES | GSE18292 | 98097415 | 98097667 | 252 | 428 |
| Oct1 | Hela | GSE14283 | 98101930 | 98101967 | 37 | 4835 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 98086875 | 98087405 | 530 | 0 |
| H3K27me3 | colorectal | cancer | 98085878 | 98086559 | 681 | 0 |
| Oct4 | hES | GSE17917 | 98085822 | 98086261 | 439 | 0 |
| hScc1 | Bcell | GSE12603 | 98084284 | 98084810 | 526 | 0 |
Validated miRNA targets