AutismKB 2.0

Annotation Detail for NRL


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Basic Information Top
Gene Symbol:NRL ( D14S46E,NRL-MAF,RP27 )
Gene Full Name: neural retina leucine zipper
Band: 14q11.2-q12
Quick LinksEntrez ID:4901; OMIM: 162080; Uniprot ID:NRL_HUMAN; ENSEMBL ID: ENSG00000129535; HGNC ID: 8002
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
6Phosphoserine(IKK)HMM predict
6PhosphoserineHMM predict
6Phosphoserine(MAPK)HMM predict
6Phosphoserine(CDC2)HMM predict
38O-linkedHMM predict
42O-linkedHMM predict
44Phosphotyrosine(SRC)HMM predict
44Phosphotyrosine(Abl)HMM predict
44Phosphotyrosine(Jak)HMM predict
45O-linkedHMM predict
46Phosphoserine(ATM)HMM predict
46O-linkedHMM predict
46O-linkedHMM predict
50Phosphoserine(CDC2)HMM predict
50PhosphoserineHMM predict
54O-linkedHMM predict
113Phosphotyrosine(INSR)HMM predict
114SulfotyrosineHMM predict
117Phosphoserine(CDC2)HMM predict
166Phosphothreonine(PKA)HMM predict
166Phosphothreonine(PKC)HMM predict
225Phosphoserine(IKK)HMM predict
229Phosphoserine(ATM)HMM predict
229Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006177
  • Location:chr14 23619216-23654062
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 23629569 23629883 314 0
CTCF CD4GSE12889 23647935 23648235 300 0
CTCF CD4SISSRdata 23629569 23629883 314 0
CTCF CD4SISSRdata 23647935 23648235 300 0
CTCF HelaGSE12889 23647930 23648297 367 0
CTCF G2GSE9613 23620284 23620756 472 0
CTCF G2GSE9613 23623429 23623718 289 0
CTCF G2GSE9613 23629678 23629875 197 0
CTCF G2GSE9613 23647777 23648197 420 0
CTCF G2GSE9613 23652853 23653044 191 0
FOXA1 MCF7GSE15244 23652853 23654650 1797 0
Fos K562GSE19551 23652794 23654535 1741 0
H3ac HepG2E 23632746 23633062 316 0
H3ac HepG2E 23652478 23652788 310 0
H3ac HepG2E 23653176 23653738 562 0
KLF4 hESGSE17917 23620553 23620775 222 0
P300 T30-glioblastomaGSE21026 23653043 23654563 1520 0
PHF8 HeLaGSE20725 23652643 23654429 1786 0
RARA MCF7GSE15244 23652818 23653738 920 0
RARG MCF7GSE15244 23653044 23653738 694 0
Rb GrowingGSE19898 23648117 23648269 152 0
TFAP2C MCF7GSE21234 23620491 23620836 345 0
TFAP2C MCF7GSE21234 23652638 23654408 1770 0
USF1 HepG2E 23632746 23633087 341 0
USF2 HepG2E 23652478 23652752 274 0
VDR GM10861-stimGSE22484 23629089 23630223 1134 0
hScc1 BcellGSE12603 23620255 23620846 591 0
hScc1 BcellGSE12603 23629678 23629875 197 0
hScc1 BcellGSE12603 23647697 23648341 644 0
hScc1 BcellGSE12603 23653532 23653887 355 0
hScc1 CdLSGSE12603 23629678 23629975 297 0
hScc1 CdLSGSE12603 23647697 23648437 740 0
p130 QuiescentGSE19898 23629533 23629747 214 0
p130 shRbSenescentGSE19898 23629575 23629787 212 0
p63 keratinocytesGSE17611 23647637 23648462 825 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
7704 mRNA WDR23 chr14 23653860 23664290 203 mRNA NRL chr14 23619215 23654063Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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