Annotation Detail for NTHL1
Basic Information Top
| Gene Symbol: | NTHL1 ( NTH1,OCTS3 ) |
|---|---|
| Gene Full Name: | nth endonuclease III-like 1 (E. coli) |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:4913; OMIM: 602656; Uniprot ID:NTHL1_HUMAN; ENSEMBL ID: ENSG00000065057; HGNC ID: 8028 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 18 | Phosphothreonine(PKC) | HMM predict |
| 22 | Phosphoserine | HMM predict |
| 22 | Phosphoserine(PKG) | HMM predict |
| 51 | Phosphoserine(PKG) | HMM predict |
| 53 | Phosphoserine | HMM predict |
| 53 | Phosphoserine(CDC2) | HMM predict |
| 73 | O-linked | HMM predict |
| 75 | O-linked | HMM predict |
| 140 | Phosphoserine(ATM) | HMM predict |
| 160 | Phosphothreonine(PKC) | HMM predict |
| 258 | Phosphoserine(IKK) | HMM predict |
| 297 | Cysteine | HMM predict |
| 306 | Cysteine | HMM predict |
- RefSeq ID: NM_002528
- Location:chr16 2029816-2037867
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| VDR | GM10861-Unstim | GSE22484 | 2037242 | 2038586 | 1344 | 47 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FoxA1 | MCF7 | MACSdata | 2029577 | 2030007 | 430 | 25 |
| TFAP2C | MCF7 | GSE21234 | 2029067 | 2029959 | 892 | 304 |
| p130 | Quiescent | GSE19898 | 2029588 | 2029824 | 236 | 111 |
| p130 | shRbQuiescent | GSE19898 | 2028944 | 2029394 | 450 | 648 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 2029764 | 2030093 | 329 | 0 |
| CTCF | G2 | GSE9613 | 2032239 | 2032416 | 177 | 0 |
| CTCF | G2 | GSE9613 | 2033928 | 2034575 | 647 | 0 |
| CTCF | G2 | GSE9613 | 2037345 | 2037954 | 609 | 0 |
| FOXA1 | MCF7 | GSE15244 | 2029356 | 2030523 | 1167 | 0 |
| NFkBII | GM12892 | GSE19485 | 2033540 | 2034587 | 1047 | 0 |
| NRSF | pAb | Jurkat | 2034206 | 2034616 | 410 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 2037518 | 2038205 | 687 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 2037129 | 2038361 | 1232 | 0 |
| TFAP2C | MCF7 | GSE21234 | 2033273 | 2033922 | 649 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9472 | EST | chr16 | 2037466 | 2038682 | 158 | mRNA | NTHL1 | chr16 | 2029816 | 2037868 | Sense/Antisense (SA) pairs | |