AutismKB 2.0

Annotation Detail for NUP98


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Basic Information Top
Gene Symbol:NUP98 ( ADIR2,NUP196,NUP96 )
Gene Full Name: nucleoporin 98kDa
Band: 11p15.4
Quick LinksEntrez ID:4928; OMIM: 601021; Uniprot ID:NUP98_HUMAN; ENSEMBL ID: ENSG00000110713; HGNC ID: 8068
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
603N6-acetyllysine.
608Phosphoserine.
612Phosphoserine.
618Phosphoserine.
623Phosphoserine.
625Phosphoserine.
670Phosphothreonine.
673Phosphoserine.
839Phosphoserine.
888Phosphoserine.
916Phosphothreonine.
934Phosphoserine.
1000Phosphothreonine.
1023Phosphoserine.
1028Phosphoserine.
1043Phosphoserine.
1060Phosphoserine.
1064Phosphoserine.
1070Phosphothreonine.
Location(AA) Modifications Resource
608Phosphoserine.Swiss-Prot 53.0
608PhosphoserinePhospho.ELM 6.0
612Phosphoserine.Swiss-Prot 53.0
612PhosphoserinePhospho.ELM 6.0
623Phosphoserine.Swiss-Prot 53.0
623PhosphoserinePhospho.ELM 6.0
839PhosphoserinePhospho.ELM 6.0
839Phosphoserine.Swiss-Prot 53.0
888PhosphoserinePhospho.ELM 6.0
888Phosphoserine.Swiss-Prot 53.0
1028Phosphoserine.Swiss-Prot 53.0
1060Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
20O-linkedHMM predict
27O-linkedHMM predict
46N-linkedHMM predict
47N-linkedHMM predict
67Phosphoserine(IKK)HMM predict
69O-linkedHMM predict
69O-linkedHMM predict
69Phosphoserine(ATM)HMM predict
73O-linkedHMM predict
75O-linkedHMM predict
77O-linkedHMM predict
85O-linkedHMM predict
99O-linkedHMM predict
134N-linkedHMM predict
137O-linkedHMM predict
138N-linkedHMM predict
161O-linkedHMM predict
230O-linkedHMM predict
231O-linkedHMM predict
231Phosphoserine(CDC2)HMM predict
234O-linkedHMM predict
238O-linkedHMM predict
255N-linkedHMM predict
257O-linkedHMM predict
293O-linkedHMM predict
304N-linkedHMM predict
335O-linkedHMM predict
337O-linkedHMM predict
338O-linkedHMM predict
339O-linkedHMM predict
341O-linkedHMM predict
375O-linkedHMM predict
377O-linkedHMM predict
378O-linkedHMM predict
379O-linkedHMM predict
382O-linkedHMM predict
386O-linkedHMM predict
404N-linkedHMM predict
407N-linkedHMM predict
413N-linkedHMM predict
417N-linkedHMM predict
471N-linkedHMM predict
472O-linkedHMM predict
473O-linkedHMM predict
474O-linkedHMM predict
516Phosphoserine(CDC2)HMM predict
546Phosphothreonine(MAPK)HMM predict
558Phosphothreonine(PKC)HMM predict
612Phosphoserine(CDC2)HMM predict
623Phosphoserine(MAPK)HMM predict
670Phosphothreonine(CDC2)HMM predict
670Phosphothreonine(MAPK)HMM predict
670Phosphothreonine(CDK)HMM predict
683Phosphoserine(IKK)HMM predict
704Phosphoserine(CK2)HMM predict
709Phosphoserine(CK2)HMM predict
724N-linkedHMM predict
725N-linkedHMM predict
772Phosphotyrosine(INSR)HMM predict
782N-linkedHMM predict
785N-linkedHMM predict
787N-linkedHMM predict
888Phosphoserine(CK2)HMM predict
888Phosphoserine(CK2)HMM predict
888PhosphoserineHMM predict
897Phosphoserine(CK1)HMM predict
899Phosphothreonine(PKC)HMM predict
913O-linkedHMM predict
913Phosphoserine(ATM)HMM predict
934Phosphoserine(CDC2)HMM predict
997Phosphoserine(PKG)HMM predict
1000Phosphothreonine(CK2)HMM predict
1018Phosphoserine(IKK)HMM predict
1022Phosphothreonine(CK2)HMM predict
1028Phosphoserine(MAPK)HMM predict
1039Phosphoserine(CK1)HMM predict
1086Phosphoserine(IKK)HMM predict
1099O-linkedHMM predict
1099Phosphoserine(CDC2)HMM predict
1099Phosphoserine(MAPK)HMM predict
1099Phosphoserine(CDK)HMM predict
1125Phosphothreonine(PKC)HMM predict
1150N-linkedHMM predict
1155N-linkedHMM predict
1161N-linkedHMM predict
1192Phosphoserine(CDC2)HMM predict
1296Phosphotyrosine(EGFR)HMM predict
1323Phosphoserine(CK1)HMM predict
1329Phosphoserine(CDC2)HMM predict
1339Phosphothreonine(PKC)HMM predict
1363Phosphoserine(ATM)HMM predict
1443O-linkedHMM predict
1447Phosphoserine(PKG)HMM predict
1449Phosphotyrosine(EGFR)HMM predict
1455N-linkedHMM predict
1462Phosphotyrosine(EGFR)HMM predict
1465Phosphoserine(MAPK)HMM predict
1486Phosphothreonine(MAPK)HMM predict
1486Phosphothreonine(CDK)HMM predict
1536N-linkedHMM predict
1681Phosphoserine(CK1)HMM predict
1713N-linkedHMM predict
1716N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005387
  • Location:chr11 3689634-3775467
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 3775132 3776139 1007 168
PHF8 HeLaGSE20725 3774681 3776286 1605 16
TFAP2C MCF7GSE21234 3775579 3776181 602 413
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 3762339 3764225 1886 0
ER E2-MCF7GSE14664 3768255 3768296 41 0
ER Fulvestrant-MCF7GSE14664 3765288 3765330 42 0
ER Fulvestrant-MCF7GSE14664 3768255 3768288 33 0
ER Fulvestrant-MCF7GSE14664 3769640 3769671 31 0
FOXA1 MCF7GSE15244 3725348 3725694 346 0
H3K4me2 HCT116GSE10453 3773706 3774894 1188 0
H3K4me3 colorectalcancer 3773274 3774776 1502 0
H3ac HepG2E 3773451 3774935 1484 0
Oct1 H2O2-HelaGSE14283 3765292 3765325 33 0
Oct1 HelaGSE14283 3704134 3704167 33 0
Oct1 HelaGSE14283 3765241 3765329 88 0
Oct1 HelaGSE14283 3768262 3768297 35 0
Oct1 HelaGSE14283 3769634 3769660 26 0
Oct1 HelaGSE14283 3774078 3774145 67 0
PHF8 293TGSE20725 3774677 3775845 1168 0
PHF8 Hs68minusFBSGSE20725 3774935 3775747 812 0
PHF8 Hs68plusFBSGSE20725 3774664 3776168 1504 0
TFAP2C MCF7GSE21234 3725428 3725844 416 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3998 mRNA chr11 3723149 3724075 926 mRNA NUP98 chr11 3652816 3775468 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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