AutismKB 2.0

Annotation Detail for ATP2B4


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Basic Information Top
Gene Symbol:ATP2B4 ( ATP2B2,DKFZp686G08106,DKFZp686M088,MXRA1,PMCA4,PMCA4b,PMCA4x )
Gene Full Name: ATPase, Ca++ transporting, plasma membrane 4
Band: 1q32.1
Quick LinksEntrez ID:493; OMIM: 108732; Uniprot ID:AT2B4_HUMAN; ENSEMBL ID: ENSG00000058668; HGNC ID: 817
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1102Phosphothreonine; by PKC (By similarity).
Location(AA) Modifications Resource
1102Phosphothreonine (by PKC) (Bysimilarity).Swiss-Prot 53.0
1212Phosphotyrosine (FAK;Src
Location(AA) Modification Resource
61Phosphoserine(CDC2)HMM predict
138Phosphothreonine(CDC2)HMM predict
138Phosphothreonine(MAPK)HMM predict
238Phosphoserine(CK1)HMM predict
328Phosphoserine(ATM)HMM predict
458N-linkedHMM predict
467PhosphothreonineHMM predict
492Phosphoserine(MAPK)HMM predict
533N-linkedHMM predict
550Phosphotyrosine(Syk)HMM predict
563Phosphotyrosine(SRC)HMM predict
574Phosphoserine(PKG)HMM predict
574Phosphoserine(IKK)HMM predict
822N-linkedHMM predict
837Phosphotyrosine(Syk)HMM predict
837Phosphotyrosine(INSR)HMM predict
954Phosphoserine(MAPK)HMM predict
957Phosphoserine(ATM)HMM predict
1023Phosphoserine(IKK)HMM predict
1065Phosphothreonine(CK2)HMM predict
1139Phosphotyrosine(Jak)HMM predict
1181Phosphothreonine(CDK)HMM predict
1210Phosphothreonine(MAPK)HMM predict
1228ProlineHMM predict
1232Phosphoserine(IKK)HMM predict
1233Phosphoserine(CK1)HMM predict
1236Phosphoserine(IKK)HMM predict
1236Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001001396
  • Location:chr1 201862550-201979829
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 201861332 201861648 316 1061
CTCF CD4SISSRdata 201861332 201861648 316 1061
CTCF JurkatGSE12889 201861476 201861658 182 984
CTCF G2GSE9613 201845257 201845888 631 16978
Fos K562GSE19551 201842986 201843548 562 19284
H3K4me2 HCT116GSE10453 201861380 201861674 294 1024
Myc K562GSE19551 201842931 201843291 360 19440
RARA MCF7GSE15244 201850751 201851244 493 11553
hScc1 BcellGSE12603 201845257 201845476 219 17184
hScc1 BcellGSE12603 201861412 201861674 262 1008
hScc1 CdLSGSE12603 201861250 201861674 424 1089
p130 shRbQuiescentGSE19898 201861954 201862721 767 213
p63 keratinocytesGSE17611 201861112 201862052 940 969
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Rb shRbQuiescentGSE19898 201986769 201987027 258 7069
hScc1 BcellGSE12603 201982993 201983218 225 3276
p63 keratinocytesGSE17611 201986506 201987341 835 7094
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 201860787 201866242 5455 0
CBP JurkatGSE17954 201884188 201886995 2807 0
CBP JurkatGSE17954 201906909 201910785 3876 0
CBP T30-glioblastomaGSE21026 201909416 201910426 1010 0
CTCF CD4GSE12889 201937869 201938138 269 0
CTCF CD4SISSRdata 201937869 201938138 269 0
CTCF G2GSE9613 201886247 201886524 277 0
CTCF G2GSE9613 201937865 201938340 475 0
FOXA1 MCF7GSE15244 201878687 201879644 957 0
FOXA1 MCF7GSE15244 201921884 201922398 514 0
Fos K562GSE19551 201885794 201886568 774 0
Fos K562GSE19551 201909603 201910378 775 0
GABP k562GSE8489 201917540 201919347 1807 0
KLF4 hESGSE17917 201927205 201927463 258 0
Myc K562GSE19551 201937822 201938154 332 0
Myc K562GSE19551 201962092 201962692 600 0
Oct4 hESGSE17917 201886269 201886460 191 0
P300 T30-glioblastomaGSE21026 201898763 201899630 867 0
PHF8 293TGSE20725 201862208 201863083 875 0
RARA MCF7GSE15244 201878852 201879572 720 0
RARA MCF7GSE15244 201909130 201910208 1078 0
Rb SenescentGSE19898 201880837 201881165 328 0
TAF HelaGSE8489 201919746 201919965 219 0
TFAP2C MCF7GSE21234 201878753 201879573 820 0
TFAP2C MCF7GSE21234 201885888 201886426 538 0
TFAP2C MCF7GSE21234 201928819 201929409 590 0
TFAP2C MCF7GSE21234 201955912 201956619 707 0
hScc1 BcellGSE12603 201865214 201865560 346 0
hScc1 BcellGSE12603 201886273 201886524 251 0
hScc1 BcellGSE12603 201931018 201931225 207 0
hScc1 BcellGSE12603 201937652 201938299 647 0
hScc1 BcellGSE12603 201939434 201939580 146 0
hScc1 CdLSGSE12603 201937051 201938413 1362 0
hScc1 G2GSE9613 201937302 201938450 1148 0
p130 QuiescentGSE19898 201885990 201886190 200 0
p130 QuiescentGSE19898 201922122 201922392 270 0
p130 SenescentGSE19898 201898595 201898839 244 0
p130 SenescentGSE19898 201898996 201899356 360 0
p130 shRbQuiescentGSE19898 201908241 201908815 574 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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