AutismKB 2.0

Annotation Detail for RNF165


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Basic Information Top
Gene Symbol:RNF165 ( ARKL2 )
Gene Full Name: ring finger protein 165
Band: 18q21.1
Quick LinksEntrez ID:494470; OMIM: NA; Uniprot ID:RN165_HUMAN; ENSEMBL ID: ENSG00000141622; HGNC ID: 31696
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
199N-linked (GlcNAc...).
Location(AA) Modifications Resource
Location(AA) Modification Resource
83Phosphothreonine(MAPK)HMM predict
128Phosphoserine(CK1)HMM predict
150Phosphothreonine(MAPK)HMM predict
199N-linkedHMM predict
201Phosphoserine(PKB)HMM predict
201Phosphoserine(IKK)HMM predict
213SulfotyrosineHMM predict
227N-linkedHMM predict
233Phosphoserine(PKB)HMM predict
238Phosphoserine(PKG)HMM predict
251N-linkedHMM predict
288Phosphoserine(CK2)HMM predict
312S-palmitoylHMM predict
334S-farnesylHMM predict
334CysteineHMM predict
335ArginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_152470
  • Location:chr18 42168184-42294780
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 42154625 42154970 345 13387
CTCF G2GSE9613 42167724 42168046 322 300
ER E2-MCF7GSE14664 42153217 42153251 34 14951
ER Fulvestrant-MCF7GSE14664 42153215 42153252 37 14951
H3K27me3 colorectalcancer 42166502 42167137 635 1365
Nanog hESGSE18292 42158604 42158907 303 9429
Oct1 HelaGSE14283 42153215 42153256 41 14949
Oct1 HelaGSE14283 42168105 42168135 30 65
PHF8 HeLaGSE20725 42167396 42168148 752 413
Sox2 hESGSE18292 42158697 42158906 209 9383
hScc1 BcellGSE12603 42167386 42168239 853 372
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 42308129 42308386 257 13477
CTCF G2GSE9613 42309044 42309222 178 14353
NRSF mAbJurkat 42313042 42313658 616 18570
P300 T30-glioblastomaGSE21026 42303346 42304044 698 8915
TFAP2C MCF7GSE21234 42302337 42303170 833 7973
TFAP2C MCF7GSE21234 42303248 42303997 749 8842
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 42176999 42179085 2086 0
ER E2-MCF7GSE14664 42179771 42179862 91 0
Fos K562GSE19551 42242426 42243139 713 0
Fos K562GSE19551 42250522 42251074 552 0
FoxA1 MCF7MACSdata 42190323 42190495 172 0
H3K27me3 colorectalcancer 42169500 42169982 482 0
H3K27me3 colorectalcancer 42170275 42170598 323 0
NRSF JurkatGSE13047 42213501 42213929 428 0
NRSF mAbJurkat 42232270 42232806 536 0
NRSF-mono JurkatQuESTdata 42213422 42213928 506 0
Nanog ESGSE20650 42282413 42282807 394 0
Oct1 HelaGSE14283 42230658 42230691 33 0
Oct1 HelaGSE14283 42231019 42231052 33 0
Oct1 HelaGSE14283 42238053 42238094 41 0
Oct1 HelaGSE14283 42246142 42246205 63 0
Oct1 HelaGSE14283 42290396 42290432 36 0
TFAP2C MCF7GSE21234 42208942 42209346 404 0
TFAP2C MCF7GSE21234 42246067 42246620 553 0
TFAP2C MCF7GSE21234 42250637 42251100 463 0
hScc1 BcellGSE12603 42181209 42181655 446 0
hScc1 BcellGSE12603 42259539 42259724 185 0
hScc1 BcellGSE12603 42266951 42267447 496 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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