Annotation Detail for OLR1

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	OLR1 ( CLEC8A,LOX1,LOXIN,SCARE1,SLOX1 )
Gene Full Name:	oxidized low density lipoprotein (lectin-like) receptor 1
Band:	12p13.2
Quick Links	Entrez ID:4973; OMIM: 602601; Uniprot ID:OLR1_HUMAN; ENSEMBL ID: ENSG00000173391; HGNC ID: 8133
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:2 results
Experimental PTM Sites from dbPTM:2 results
Predicted PTM Sites by profile HMM from dbPTM:10 results

Location(AA)	Modification
73	N-linked (GlcNAc...) (Potential).
139	N-linked (GlcNAc...) (Potential).

Location(AA)	Modification	Resource
61	Phosphoserine(ATM)	HMM predict
73	N-linked	HMM predict
95	Phosphoserine(ATM)	HMM predict
95	Phosphoserine(CK1)	HMM predict
98	Phosphoserine(CK2)	HMM predict
139	N-linked	HMM predict
183	N-linked	HMM predict
210	N-linked	HMM predict
212	Phosphoserine(PKA)	HMM predict
269	Asparagine	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_002543
Location:chr12 10202168-10216003
strand:-

Upstream the gene:0 results
Downstream the gene:10 results
Inside the gene:2 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	10197186	10197370	184	4891
CTCF	CD4	SISSRdata	10197186	10197370	184	4891
CTCF	G2	GSE9613	10197299	10197690	391	4674
Oct1	Hela	GSE14283	10195568	10195597	29	6586
Oct1	Hela	GSE14283	10199900	10199939	39	2249
hScc1	Bcell	GSE12603	10197299	10197690	391	4674
hScc1	CdLS	GSE12603	10197299	10197690	391	4674
hScc1	G2	GSE9613	10197299	10197690	391	4674
p130	Quiescent	GSE19898	10197820	10197983	163	4267
p130	Senescent	GSE19898	10197248	10197572	324	4759

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
FOXA1	DLD1	GSE12801	10212873	10213531	658	0
TFAP2C	MCF7	GSE21234	10214110	10214592	482	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
5667	EST		chr12	10214495	10219376	1509	mRNA	OLR1	chr12	10202168	10216004	Non-exonic Bidirectional (NOB) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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