AutismKB 2.0

Annotation Detail for SLC22A18AS


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Basic Information Top
Gene Symbol:SLC22A18AS ( BWR1B,BWSCR1B,ORCTL2S,SLC22A1LS,p27-BWR1B )
Gene Full Name: solute carrier family 22 (organic cation transporter), member 18 antisense
Band: 11p15.4
Quick LinksEntrez ID:5003; OMIM: 603240; Uniprot ID:BWR1B_HUMAN; ENSEMBL ID: ENSG00000254827; HGNC ID: 10965
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
70Phosphoserine(PKG)HMM predict
73Phosphothreonine(PKC)HMM predict
85MethylarginineHMM predict
157N-linkedHMM predict
200Phosphothreonine(PKC)HMM predict
213Phosphothreonine(CDC2)HMM predict
241O-linkedHMM predict
243Phosphothreonine(MAPK)HMM predict
245O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_007105
  • Location:chr11 2865903-2881545
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 2876071 2877069 998 0
CTCF CD4GSE12889 2866129 2866519 390 0
CTCF CD4SISSRdata 2866129 2866519 390 0
CTCF HelaGSE12889 2866222 2866472 250 0
ETS1 JurkatGSE17954 2869859 2871085 1226 0
Myc K562GSE19551 2876443 2876908 465 0
NRSF pAbJurkat 2868092 2869127 1035 0
NRSF pAbJurkat 2873798 2875319 1521 0
P300 T30-glioblastomaGSE21026 2876304 2877325 1021 0
PHF8 HeLaGSE20725 2879390 2881288 1898 0
Rb GrowingGSE19898 2876639 2876827 188 0
Rb SenescentGSE19898 2870239 2870702 463 0
Rb SenescentGSE19898 2879945 2880273 328 0
TAF HelaGSE8489 2871115 2871288 173 0
hScc1 BcellGSE12603 2866129 2866439 310 0
hScc1 BcellGSE12603 2866966 2867244 278 0
hScc1 BcellGSE12603 2869781 2870880 1099 0
hScc1 CdLSGSE12603 2865839 2866439 600 0
hScc1 CdLSGSE12603 2869781 2870281 500 0
hScc1 G2GSE9613 2865540 2866439 899 0
hScc1 G2GSE9613 2869517 2870586 1069 0
p130 shRbQuiescentGSE19898 2869830 2870502 672 0
p130 shRbSenescentGSE19898 2879920 2880291 371 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3983 mRNA SLC22A18 chr11 2877526 2903051 101 mRNA SLC22A1LS chr11 2865903 2881546Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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