Annotation Detail for PAFAH1B1
Basic Information Top
| Gene Symbol: | PAFAH1B1 ( LIS1,LIS2,MDCR,MDS,PAFAH ) |
|---|---|
| Gene Full Name: | platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) |
| Band: | 17p13.3 |
| Quick Links | Entrez ID:5048; OMIM: 601545; Uniprot ID:LIS1_HUMAN; ENSEMBL ID: ENSG00000007168; HGNC ID: 8574 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 28 | Phosphotyrosine (By similarity). | |
| 53 | N6-acetyllysine. | |
| 225 | Phosphotyrosine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | Phosphotyrosine(Syk) | HMM predict |
| 24 | Phosphotyrosine(INSR) | HMM predict |
| 24 | Phosphotyrosine(EGFR) | HMM predict |
| 28 | Phosphotyrosine(Syk) | HMM predict |
| 28 | Phosphotyrosine(SRC) | HMM predict |
| 109 | Phosphoserine(CDC2) | HMM predict |
| 109 | Phosphoserine(CDK) | HMM predict |
| 127 | Phosphoserine(IKK) | HMM predict |
| 194 | N-linked | HMM predict |
| 290 | Phosphotyrosine(SRC) | HMM predict |
| 291 | Phosphoserine(CK1) | HMM predict |
| 291 | O-linked | HMM predict |
| 304 | Phosphoserine(PKG) | HMM predict |
| 394 | Phosphotyrosine(Jak) | HMM predict |
| 397 | Threonine | HMM predict |
- RefSeq ID: NM_000430
- Location:chr17 2443685-2535637
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 2443405 | 2443606 | 201 | 180 |
| CTCF | CD4 | SISSRdata | 2443405 | 2443606 | 201 | 180 |
| CTCF | G2 | GSE9613 | 2443252 | 2444038 | 786 | 41 |
| H3ac | HepG2 | E | 2442891 | 2443179 | 288 | 651 |
| PHF8 | 293T | GSE20725 | 2442908 | 2444368 | 1460 | 48 |
| TAF | Hela | GSE8489 | 2442891 | 2443223 | 332 | 629 |
| hScc1 | Bcell | GSE12603 | 2443103 | 2444038 | 935 | 115 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| VDR | GM10861-stim | GSE22484 | 2534420 | 2540556 | 6136 | 1851 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 2525415 | 2525587 | 172 | 0 |
| CTCF | CD4 | SISSRdata | 2525415 | 2525587 | 172 | 0 |
| ER | MCF7 | GSE19013 | 2458513 | 2459032 | 519 | 0 |
| FoxA1 | MCF7 | MACSdata | 2533984 | 2534224 | 240 | 0 |
| H3K4me3 | colorectal | cancer | 2444795 | 2445435 | 640 | 0 |
| H3ac | HepG2 | E | 2445049 | 2446131 | 1082 | 0 |
| PHF8 | HeLa | GSE20725 | 2442885 | 2444770 | 1885 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 2442888 | 2444559 | 1671 | 0 |
| TAF | k562 | GSE8489 | 2444976 | 2445545 | 569 | 0 |
| hScc1 | Bcell | GSE12603 | 2463223 | 2463671 | 448 | 0 |
| hScc1 | CdLS | GSE12603 | 2525347 | 2525542 | 195 | 0 |
| p130 | Senescent | GSE19898 | 2443733 | 2443943 | 210 | 0 |
| p130 | shRbSenescent | GSE19898 | 2444761 | 2445184 | 423 | 0 |
Validated miRNA targets