Annotation Detail for CALY

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Basic Information Top

Gene Symbol:	CALY ( DRD1IP,NSG3 )
Gene Full Name:	calcyon neuron-specific vesicular protein
Band:	10q26.3
Quick Links	Entrez ID:50632; OMIM: 604647; Uniprot ID:CALY_HUMAN; ENSEMBL ID: ENSG00000130643; HGNC ID: 17938
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:2 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
73	N-linked (GlcNAc...) (Probable).
151	Phosphotyrosine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_015722
Location:chr10 134988922-135000400
strand:-

Upstream the gene:1 results
Downstream the gene:1 results
Inside the gene:9 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
c	MYC	MCF7	135001423	135001770	347	1196

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Fos	K562	GSE19551	134984454	134984979	525	4206

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	134993220	134993558	338	0
CTCF	CD4	SISSRdata	134993220	134993558	338	0
CTCF	Hela	GSE12889	134993284	134993498	214	0
CTCF	Jurkat	GSE12889	134993195	134993485	290	0
H3K27me3	colorectal	cancer	134997918	134998252	334	0
TFAP2C	MCF7	GSE21234	134991745	134992288	543	0
hScc1	Bcell	GSE12603	134991801	134992336	535	0
hScc1	Bcell	GSE12603	134993347	134993582	235	0
hScc1	CdLS	GSE12603	134993347	134993674	327	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
3885	EST		chr10	135028429	135028863	76	mRNA	DRD1IP	chr10	135027813	135039292	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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