Annotation Detail for PAX3
Basic Information Top
| Gene Symbol: | PAX3 ( CDHS,HUP2,MGC120381,MGC120382,MGC120383,MGC120384,MGC134778,WS1,WS3 ) |
|---|---|
| Gene Full Name: | paired box 3 |
| Band: | 2q36.1 |
| Quick Links | Entrez ID:5077; OMIM: 606597; Uniprot ID:PAX3_HUMAN; ENSEMBL ID: ENSG00000135903; HGNC ID: 8617 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
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| Location(AA) | Modification | Resource |
|---|---|---|
| 153 | Phosphoserine(CK1) | HMM predict |
| 205 | Phosphoserine(CK1) | HMM predict |
| 209 | Phosphoserine(CK1) | HMM predict |
| 222 | Phosphoserine(PKG) | HMM predict |
| 222 | Phosphoserine(PKA) | HMM predict |
| 243 | Sulfotyrosine | HMM predict |
| 247 | Sulfotyrosine | HMM predict |
| 247 | Phosphotyrosine(INSR) | HMM predict |
| 259 | Phosphothreonine(PKC) | HMM predict |
| 297 | O-linked | HMM predict |
| 312 | Phosphotyrosine(SRC) | HMM predict |
| 312 | Phosphotyrosine(Syk) | HMM predict |
| 315 | O-linked | HMM predict |
| 316 | O-linked | HMM predict |
| 325 | Phosphoserine(CK1) | HMM predict |
| 327 | Phosphothreonine(PKC) | HMM predict |
| 354 | Phosphotyrosine(INSR) | HMM predict |
| 374 | Phosphoserine(IKK) | HMM predict |
| 377 | O-linked | HMM predict |
| 381 | N-linked | HMM predict |
| 386 | N-linked | HMM predict |
| 389 | Phosphoserine(ATM) | HMM predict |
| 422 | O-linked | HMM predict |
| 424 | O-linked | HMM predict |
| 426 | O-linked | HMM predict |
| 430 | Phosphoserine(ATM) | HMM predict |
| 441 | Phosphoserine(IKK) | HMM predict |
| 441 | Phosphoserine(CK1) | HMM predict |
| 445 | Phosphoserine(IKK) | HMM predict |
| 447 | Phosphoserine(IKK) | HMM predict |
| 452 | O-linked | HMM predict |
| 453 | Phosphotyrosine(Abl) | HMM predict |
| 466 | Phosphotyrosine(Jak) | HMM predict |
- RefSeq ID: NM_013942
- Location:chr2 222866592-222871943
- strand:-
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| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 222867102 | 222867495 | 393 | 0 |
| CTCF | G2 | GSE9613 | 222868616 | 222868843 | 227 | 0 |
| CTCF | G2 | GSE9613 | 222869961 | 222870104 | 143 | 0 |
| H3K27me3 | colorectal | cancer | 222867565 | 222868546 | 981 | 0 |
| H3K27me3 | colorectal | cancer | 222868874 | 222874331 | 5457 | 0 |
| H3K4me3 | colorectal | cancer | 222870173 | 222870650 | 477 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-1 | hsa-mir-1-2 | 18 | 20956382 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 20956382 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 20502458 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 20502458 |
| hsa-miR-133a | hsa-mir-133a-1 | 18 | 20502458 |
| hsa-miR-133a | hsa-mir-133a-2 | 20 | 20502458 |
| hsa-miR-133b | hsa-mir-133b | 6 | 20502458 |
| hsa-miR-206 | hsa-mir-206 | 6 | 20956382 |
| hsa-miR-206 | hsa-mir-206 | 6 | 20502458 |
| hsa-miR-27a | hsa-mir-27a | 19 | 19666532 |
| hsa-miR-27a* | hsa-mir-27a | 19 | 19666532 |
| hsa-miR-27b | hsa-mir-27b | 9 | 19666532 |
| hsa-miR-27b* | hsa-mir-27b | 9 | 19666532 |
| hsa-miR-30a | hsa-mir-30a | 6 | 16574096 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 16574096 |
| hsa-miR-30b | hsa-mir-30b | 8 | 16574096 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 16574096 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 16574096 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 16574096 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 16574096 |
| hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 16574096 |
| hsa-miR-30d | hsa-mir-30d | 8 | 16574096 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 16574096 |
| hsa-miR-30e | hsa-mir-30e | 1 | 16574096 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 16574096 |
| No data |
| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15699 | mRNA | FLJ32447 | chr2 | 222988370 | 222995441 | 835 | mRNA | PAX3 | chr2 | 222890111 | 222989205 | Non-exonic Bidirectional (NOB) pairs |