AutismKB 2.0

Annotation Detail for PAX5


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:PAX5 ( BSAP )
Gene Full Name: paired box 5
Band: 9p13.2
Quick LinksEntrez ID:5079; OMIM: 167414; Uniprot ID:PAX5_HUMAN; ENSEMBL ID: ENSG00000196092; HGNC ID: 8619
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
9Phosphothreonine(MAPK)HMM predict
106N-linkedHMM predict
126N-linkedHMM predict
154Phosphoserine(CK2)HMM predict
155O-linkedHMM predict
155O-linkedHMM predict
157Phosphoserine(IKK)HMM predict
157Phosphoserine(CK1)HMM predict
160O-linkedHMM predict
161O-linkedHMM predict
165O-linkedHMM predict
168O-linkedHMM predict
168O-linkedHMM predict
174O-linkedHMM predict
177Phosphoserine(CK1)HMM predict
189Phosphoserine(MAPK)HMM predict
264Phosphotyrosine(SRC)HMM predict
283Phosphoserine(CDK)HMM predict
283Phosphoserine(CDC2)HMM predict
291O-linkedHMM predict
292O-linkedHMM predict
328O-linkedHMM predict
333O-linkedHMM predict
342O-linkedHMM predict
344O-linkedHMM predict
344Phosphoserine(ATM)HMM predict
344Phosphoserine(CDC2)HMM predict
346Phosphotyrosine(Abl)HMM predict
346Phosphotyrosine(Jak)HMM predict
351Phosphotyrosine(SRC)HMM predict
355N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016734
  • Location:chr9 36828530-37024475
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 37024887 37026368 1481 1152
H3K27me3 colorectalcancer 37031172 37032638 1466 7430
H3K27me3 colorectalcancer 37034771 37035104 333 10462
H3K27me3 colorectalcancer 37037760 37038089 329 13449
Oct1 H2O2-HelaGSE14283 37029021 37029058 37 4564
Oct1 HelaGSE14283 37029021 37029058 37 4564
Oct1 HelaGSE14283 37034167 37034194 27 9705
Oct1 HelaGSE14283 37040194 37040247 53 15745
hScc1 BcellGSE12603 37024173 37025172 999 197
hScc1 BcellGSE12603 37025601 37025857 256 1254
hScc1 BcellGSE12603 37031318 37031689 371 7028
hScc1 CdLSGSE12603 37024036 37025143 1107 114
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 36812726 36812753 27 15791
Oct1 HelaGSE14283 36821925 36821977 52 6580
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 36913792 36914680 888 0
CTCF CD4GSE12889 36852248 36852397 149 0
CTCF CD4GSE12889 36863225 36863653 428 0
CTCF CD4GSE12889 36985897 36986087 190 0
CTCF CD4SISSRdata 36852248 36852397 149 0
CTCF CD4SISSRdata 36863225 36863653 428 0
CTCF CD4SISSRdata 36985897 36986087 190 0
CTCF HelaGSE12889 36852215 36852537 322 0
CTCF HelaGSE12889 36863342 36863522 180 0
CTCF HelaGSE12889 36981575 36981868 293 0
CTCF JurkatGSE12889 36845559 36845792 233 0
CTCF JurkatGSE12889 36970325 36970472 147 0
ER E2-MCF7GSE14664 36850816 36850856 40 0
FOXA1 MCF7GSE15244 36881244 36882678 1434 0
FOXA1 MCF7GSE15244 36913487 36914409 922 0
Fos K562GSE19551 36914015 36914432 417 0
Fos K562GSE19551 37017605 37017999 394 0
FoxA1 MCF7MACSdata 36913955 36914389 434 0
H3K27me3 colorectalcancer 37022036 37022723 687 0
H3K27me3 colorectalcancer 37023189 37024173 984 0
NFkBII GM10847GSE19485 36982438 36986803 4365 0
NFkBII GM12878GSE19485 36936295 36937398 1103 0
NFkBII GM12878GSE19485 36982529 36986912 4383 0
NFkBII GM15510GSE19485 36983489 36985573 2084 0
NRSF JurkatGSE13047 36964322 36964774 452 0
NRSF JurkatGSE13047 37016217 37018246 2029 0
NRSF mAbJurkat 37010568 37015122 4554 0
NRSF mAbJurkat 37015757 37016268 511 0
NRSF mAbJurkat 37017932 37020102 2170 0
NRSF mAbJurkat 37023082 37024479 1397 0
NRSF-mono JurkatQuESTdata 36964321 36964773 452 0
NRSF-mono JurkatQuESTdata 36981605 36981957 352 0
NRSF-mono JurkatQuESTdata 37015994 37018236 2242 0
NRSF-poly JurkatQuESTdata 36964341 36964816 475 0
NRSF-poly JurkatQuESTdata 37017216 37018478 1262 0
Nanog hESGSE18292 36897114 36897511 397 0
Oct1 H2O2-HelaGSE14283 36841421 36841466 45 0
Oct1 HelaGSE14283 36840290 36840329 39 0
Oct1 HelaGSE14283 36841418 36841477 59 0
Oct1 HelaGSE14283 36879109 36879139 30 0
Oct1 HelaGSE14283 36900084 36900165 81 0
Oct1 HelaGSE14283 36901919 36901945 26 0
Oct1 HelaGSE14283 36922480 36922536 56 0
Oct1 HelaGSE14283 36973234 36973272 38 0
Oct1 HelaGSE14283 37003733 37003791 58 0
P300 T30-glioblastomaGSE21026 36913726 36914738 1012 0
Rb GrowingGSE19898 36852214 36852443 229 0
SRF k562GSE8489 36939959 36940372 413 0
TAF HelaGSE8489 36939996 36940372 376 0
TAF k562GSE8489 36939959 36940372 413 0
TFAP2C MCF7GSE21234 36849508 36849798 290 0
TFAP2C MCF7GSE21234 36952257 36952661 404 0
VDR GM10855-stimGSE22484 36992841 36998055 5214 0
VDR GM10861-stimGSE22484 36979781 36987749 7968 0
VDR GM10861-stimGSE22484 36991039 36997503 6464 0
hScc1 BcellGSE12603 36845242 36846040 798 0
hScc1 BcellGSE12603 36851984 36852539 555 0
hScc1 BcellGSE12603 36862370 36862895 525 0
hScc1 BcellGSE12603 36863216 36863731 515 0
hScc1 BcellGSE12603 36885039 36885272 233 0
hScc1 BcellGSE12603 36889310 36889776 466 0
hScc1 BcellGSE12603 36959093 36959660 567 0
hScc1 BcellGSE12603 36964776 36965089 313 0
hScc1 BcellGSE12603 36970033 36970556 523 0
hScc1 BcellGSE12603 36981497 36981991 494 0
hScc1 BcellGSE12603 37015621 37017976 2355 0
hScc1 BcellGSE12603 37019668 37020876 1208 0
hScc1 CdLSGSE12603 36845421 36845847 426 0
hScc1 CdLSGSE12603 36862835 36863731 896 0
hScc1 CdLSGSE12603 36981497 36982024 527 0
hScc1 CdLSGSE12603 36985854 36986430 576 0
hScc1 G2GSE9613 36863216 36863731 515 0
hScc1 G2GSE9613 36981497 36982541 1044 0
p63 keratinocytesGSE17611 36848607 36849587 980 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-15a hsa-mir-15a 13 18708755
hsa-miR-15a* hsa-mir-15a 13 18708755
hsa-miR-16 hsa-mir-16-1 13 18708755
hsa-miR-16 hsa-mir-16-2 3 18708755
hsa-miR-16-1* hsa-mir-16-1 13 18708755
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved