AutismKB 2.0

Annotation Detail for IRX4


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Basic Information Top
Gene Symbol:IRX4 ( IRXA3,MGC131996 )
Gene Full Name: iroquois homeobox 4
Band: 5p15.33
Quick LinksEntrez ID:50805; OMIM: 606199; Uniprot ID:IRX4_HUMAN; ENSEMBL ID: ENSG00000113430; HGNC ID: 6129
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
10Phosphotyrosine(Jak)HMM predict
22Phosphoserine(IKK)HMM predict
37O-linkedHMM predict
83Phosphotyrosine(INSR)HMM predict
137SulfotyrosineHMM predict
139Phosphothreonine(PKC)HMM predict
148N-linkedHMM predict
153Phosphothreonine(PKA)HMM predict
171Phosphothreonine(PKC)HMM predict
258Phosphoserine(CK2)HMM predict
258Phosphoserine(ATM)HMM predict
258Phosphoserine(CK1)HMM predict
383O-linkedHMM predict
384Phosphoserine(IKK)HMM predict
386Phosphoserine(ATM)HMM predict
407O-linkedHMM predict
408O-linkedHMM predict
413Phosphoserine(CDC2)HMM predict
415O-linkedHMM predict
430Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016358
  • Location:chr5 1930548-1935879
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1939618 1941454 1836 4657
CTCF G2GSE9613 1941872 1942507 635 6310
CTCF G2GSE9613 1942791 1943578 787 7305
CTCF G2GSE9613 1944577 1944725 148 8772
CTCF G2GSE9613 1949882 1950131 249 14127
CTCF G2GSE9613 1950651 1951134 483 15013
CTCF G2GSE9613 1952461 1952818 357 16760
ER MCF7GSE19013 1940837 1941567 730 5323
TFAP2C MCF7GSE21234 1937201 1937561 360 1502
TFAP2C MCF7GSE21234 1940635 1941572 937 5224
TFAP2C MCF7GSE21234 1942910 1943553 643 7352
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1911696 1912019 323 18691
CTCF G2GSE9613 1913426 1913750 324 16961
CTCF G2GSE9613 1917783 1918346 563 12484
CTCF G2GSE9613 1921494 1922490 996 8557
CTCF G2GSE9613 1925462 1925917 455 4859
CTCF G2GSE9613 1929377 1929589 212 1066
ER MCF7GSE19013 1917782 1918558 776 12379
FoxA1 MCF7MACSdata 1918096 1918534 438 12234
RUNX JurkatGSE17954 1923960 1924049 89 6544
RUNX JurkatGSE17954 1924080 1924174 94 6422
TFAP2C MCF7GSE21234 1925466 1925970 504 4831
hScc1 BcellGSE12603 1929434 1929915 481 874
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1934639 1935286 647 0
NRSF JurkatGSE13047 1932547 1933215 668 0
NRSF-mono JurkatQuESTdata 1932417 1933251 834 0
NRSF-poly JurkatQuESTdata 1932579 1933215 636 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 18023168
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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