AutismKB 2.0

Annotation Detail for PAX7


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:PAX7 ( FLJ37460,HUP1,PAX7B,RMS2 )
Gene Full Name: paired box 7
Band: 1p36.13
Quick LinksEntrez ID:5081; OMIM: 167410; Uniprot ID:PAX7_HUMAN; ENSEMBL ID: ENSG00000009709; HGNC ID: 8621
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
150O-linkedHMM predict
195O-linkedHMM predict
203Phosphoserine(CK1)HMM predict
207Phosphoserine(CK1)HMM predict
220Phosphoserine(PKG)HMM predict
220Phosphoserine(PKA)HMM predict
241SulfotyrosineHMM predict
245Phosphotyrosine(INSR)HMM predict
245SulfotyrosineHMM predict
312O-linkedHMM predict
313O-linkedHMM predict
314O-linkedHMM predict
348O-linkedHMM predict
349O-linkedHMM predict
383Phosphoserine(ATM)HMM predict
383Phosphoserine(CDC2)HMM predict
392N-linkedHMM predict
394O-linkedHMM predict
418Phosphoserine(CK1)HMM predict
418O-linkedHMM predict
424Phosphoserine(ATM)HMM predict
429Phosphoserine(PKG)HMM predict
446O-linkedHMM predict
447Phosphotyrosine(Abl)HMM predict
482Phosphoserine(CDK)HMM predict
482O-linkedHMM predict
482Phosphoserine(MAPK)HMM predict
482Phosphoserine(CDC2)HMM predict
484Phosphothreonine(MAPK)HMM predict
484O-linkedHMM predict
506Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002584
  • Location:chr1 18830086-18935217
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 18829168 18829533 365 736
H3K27me3 colorectalcancer 18822972 18823149 177 7026
H3K27me3 colorectalcancer 18823560 18825176 1616 5719
H3K27me3 colorectalcancer 18826820 18828771 1951 2291
P300 T30-glioblastomaGSE21026 18817589 18818113 524 12236
hScc1 BcellGSE12603 18829453 18830672 1219 24
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 18936017 18936376 359 979
CTCF G2GSE9613 18940702 18940923 221 5595
CTCF G2GSE9613 18941540 18941925 385 6515
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 18880570 18880785 215 0
CTCF CD4SISSRdata 18880570 18880785 215 0
CTCF HelaGSE12889 18880567 18880772 205 0
CTCF JurkatGSE12889 18880495 18880766 271 0
CTCF G2GSE9613 18842283 18842733 450 0
CTCF G2GSE9613 18842979 18843216 237 0
CTCF G2GSE9613 18845886 18846432 546 0
CTCF G2GSE9613 18880284 18880747 463 0
CTCF G2GSE9613 18883248 18883425 177 0
CTCF G2GSE9613 18888543 18888721 178 0
CTCF G2GSE9613 18897721 18898263 542 0
CTCF G2GSE9613 18899612 18899763 151 0
CTCF G2GSE9613 18902122 18902433 311 0
CTCF G2GSE9613 18919444 18919740 296 0
CTCF G2GSE9613 18934681 18935039 358 0
Fos K562GSE19551 18902433 18902852 419 0
H3K27me3 colorectalcancer 18830861 18832348 1487 0
Myc K562GSE19551 18880482 18880782 300 0
NRSF JurkatGSE13047 18852228 18853183 955 0
NRSF mAbJurkat 18852130 18854004 1874 0
NRSF mAbJurkat 18854532 18855073 541 0
NRSF-mono JurkatQuESTdata 18852371 18853143 772 0
NRSF-poly JurkatQuESTdata 18852398 18853043 645 0
Nanog hESGSE18292 18880563 18880752 189 0
Oct1 HelaGSE14283 18925967 18925999 32 0
Rb GrowingGSE19898 18928138 18928298 160 0
STAT1 HeLaGSE12782 18880159 18880870 711 0
STAT1 HeLaGSE12783 18880193 18880870 677 0
STAT1 IFNSISSRdata 18880230 18880777 547 0
Sox2 hESGSE18292 18880580 18880751 171 0
TFAP2C MCF7GSE21234 18865368 18866208 840 0
TFAP2C MCF7GSE21234 18867752 18868338 586 0
TFAP2C MCF7GSE21234 18902329 18902890 561 0
hScc1 BcellGSE12603 18867066 18867466 400 0
hScc1 BcellGSE12603 18880349 18880747 398 0
hScc1 BcellGSE12603 18897614 18898335 721 0
hScc1 BcellGSE12603 18915491 18916268 777 0
hScc1 BcellGSE12603 18920042 18920302 260 0
hScc1 BcellGSE12603 18924124 18924453 329 0
hScc1 BcellGSE12603 18930362 18930757 395 0
hScc1 BcellGSE12603 18932460 18933688 1228 0
hScc1 CdLSGSE12603 18880385 18880747 362 0
hScc1 G2GSE9613 18880349 18880747 398 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7a hsa-let-7a-1 9 20876843
hsa-let-7a hsa-let-7a-2 11 20876843
hsa-let-7a hsa-let-7a-3 22 20876843
hsa-let-7a* hsa-let-7a-1 9 20876843
hsa-let-7a* hsa-let-7a-3 22 20876843
hsa-let-7b hsa-let-7b 22 20876843
hsa-let-7b* hsa-let-7b 22 20876843
hsa-let-7c hsa-let-7c 21 20876843
hsa-let-7c* hsa-let-7c 21 20876843
hsa-let-7d hsa-let-7d 9 20876843
hsa-let-7d* hsa-let-7d 9 20876843
hsa-let-7e hsa-let-7e 19 20876843
hsa-let-7e* hsa-let-7e 19 20876843
hsa-let-7f hsa-let-7f-1 9 20876843
hsa-let-7f hsa-let-7f-2 X 20876843
hsa-let-7f-1* hsa-let-7f-1 9 20876843
hsa-let-7f-2* hsa-let-7f-2 X 20876843
hsa-let-7g hsa-let-7g 3 20876843
hsa-let-7g* hsa-let-7g 3 20876843
hsa-let-7i hsa-let-7i 12 20876843
hsa-let-7i* hsa-let-7i 12 20876843
hsa-miR-1 hsa-mir-1-2 18 20841498
hsa-miR-1 hsa-mir-1-1 20 20841498
hsa-miR-1 hsa-mir-1-2 18 20819939
hsa-miR-1 hsa-mir-1-1 20 20819939
hsa-miR-1 hsa-mir-1-2 18 20727829
hsa-miR-1 hsa-mir-1-1 20 20727829
hsa-miR-1 hsa-mir-1-2 18 19754672
hsa-miR-1 hsa-mir-1-1 20 19754672
hsa-miR-10b hsa-mir-10b 2 20841498
hsa-miR-10b* hsa-mir-10b 2 20841498
hsa-miR-133a hsa-mir-133a-1 18 19754672
hsa-miR-133a hsa-mir-133a-2 20 19754672
hsa-miR-133b hsa-mir-133b 6 19754672
hsa-miR-196a hsa-mir-196a-1 17 19682983
hsa-miR-196a hsa-mir-196a-2 12 19682983
hsa-miR-196a* hsa-mir-196a-2 12 19682983
hsa-miR-196b hsa-mir-196b 7 19682983
hsa-miR-206 hsa-mir-206 6 21041476
hsa-miR-206 hsa-mir-206 6 20819939
hsa-miR-206 hsa-mir-206 6 20727829
hsa-miR-206 hsa-mir-206 6 19754672
hsa-miR-27a hsa-mir-27a 19 19666532
hsa-miR-27a* hsa-mir-27a 19 19666532
hsa-miR-27b hsa-mir-27b 9 19666532
hsa-miR-27b* hsa-mir-27b 9 19666532
hsa-miR-29a hsa-mir-29a 7 20727829
hsa-miR-29a* hsa-mir-29a 7 20727829
hsa-miR-29b hsa-mir-29b-1 7 20727829
hsa-miR-29b hsa-mir-29b-2 1 20727829
hsa-miR-29b-1* hsa-mir-29b-1 7 20727829
hsa-miR-29b-2* hsa-mir-29b-2 1 20727829
hsa-miR-29c hsa-mir-29c 1 20727829
hsa-miR-29c* hsa-mir-29c 1 20727829
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved