Annotation Detail for PCCB
Basic Information Top
| Gene Symbol: | PCCB ( DKFZp451E113 ) |
|---|---|
| Gene Full Name: | propionyl CoA carboxylase, beta polypeptide |
| Band: | 3q22.3 |
| Quick Links | Entrez ID:5096; OMIM: 232050; Uniprot ID:PCCB_HUMAN; ENSEMBL ID: ENSG00000114054; HGNC ID: 8654 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 60 | N6-acetyllysine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 60 | N6-acetyllysine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 15 | Phosphoserine(PKG) | HMM predict |
| 30 | Phosphoserine(ATM) | HMM predict |
| 78 | Phosphoserine(IKK) | HMM predict |
| 183 | N-linked | HMM predict |
| 282 | Phosphoserine(ATM) | HMM predict |
| 314 | Phosphotyrosine(Syk) | HMM predict |
| 439 | Phosphotyrosine(INSR) | HMM predict |
| 511 | Phosphothreonine(PKC) | HMM predict |
- RefSeq ID: NM_000532
- Location:chr3 137451837-137531693
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 137441513 | 137441545 | 32 | 10309 |
| P300 | T30-glioblastoma | GSE21026 | 137433763 | 137434486 | 723 | 17713 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Myc | K562 | GSE19551 | 137532545 | 137532874 | 329 | 1016 |
| Rb | shRbQuiescent | GSE19898 | 137534947 | 137535130 | 183 | 3345 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 137507516 | 137507642 | 126 | 0 |
| CTCF | CD4 | SISSRdata | 137507516 | 137507642 | 126 | 0 |
| CTCF | G2 | GSE9613 | 137451620 | 137452133 | 513 | 0 |
| CTCF | G2 | GSE9613 | 137464102 | 137464425 | 323 | 0 |
| FOXA1 | MCF7 | GSE15244 | 137452027 | 137452948 | 921 | 0 |
| FoxA1 | MCF7 | MACSdata | 137468092 | 137468288 | 196 | 0 |
| H3ac | HepG2 | E | 137456722 | 137457276 | 554 | 0 |
| KLF4 | hES | GSE17917 | 137531001 | 137531431 | 430 | 0 |
| Myc | hES | GSE17917 | 137451695 | 137452060 | 365 | 0 |
| Nanog | ES | GSE20650 | 137498468 | 137498982 | 514 | 0 |
| Oct4 | hES | GSE17917 | 137451684 | 137452181 | 497 | 0 |
| Oct4 | hES | GSE21916 | 137498379 | 137498945 | 566 | 0 |
| PHF8 | HeLa | GSE20725 | 137451544 | 137452614 | 1070 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 137451628 | 137452393 | 765 | 0 |
| Sox2 | hES | GSE18292 | 137498588 | 137498779 | 191 | 0 |
| TFAP2C | MCF7 | GSE21234 | 137478966 | 137479743 | 777 | 0 |
| TFAP2C | MCF7 | GSE21234 | 137497227 | 137497677 | 450 | 0 |
| hScc1 | Bcell | GSE12603 | 137451620 | 137452176 | 556 | 0 |
| hScc1 | CdLS | GSE12603 | 137451620 | 137453379 | 1759 | 0 |
| hScc1 | G2 | GSE9613 | 137451620 | 137452176 | 556 | 0 |
| p130 | Senescent | GSE19898 | 137451787 | 137452231 | 444 | 0 |
| p63 | keratinocytes | GSE17611 | 137477727 | 137478543 | 816 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18723 | mRNA | PCCB | chr3 | 137451897 | 137539435 | 739 | mRNA | STAG1 | chr3 | 137538696 | 137953943 | Sense/Antisense (SA) pairs |