Annotation Detail for PPPDE1

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Basic Information Top

Gene Symbol:	PPPDE1 ( C1orf121,FAM152A,FLJ21998,PNAS-4 )
Gene Full Name:	PPPDE peptidase domain containing 1
Band:	1q44
Quick Links	Entrez ID:51029; OMIM: NA; Uniprot ID:PPDE1_HUMAN; ENSEMBL ID: ENSG00000121644; HGNC ID:
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_016076
Location:chr1 242882974-242938954
strand:+

Upstream the gene:8 results
Downstream the gene:1 results
Inside the gene:8 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	242882706	242883006	300	119
ETS1	Jurkat	GSE17954	242882138	242883796	1658	8
P300	T30-glioblastoma	GSE21026	242882093	242883787	1694	35
PHF8	HeLa	GSE20725	242882049	242883679	1630	111
Rb	Senescent	GSE19898	242882195	242883115	920	320
TAF	k562	GSE8489	242881686	242882455	769	904
TFAP2C	MCF7	GSE21234	242882275	242882885	610	395
p130	shRbSenescent	GSE19898	242882234	242883056	822	330

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
FoxA1	MCF7	MACSdata	242949549	242949987	438	10814

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	242924430	242924646	216	0
H3K4me2	HCT116	GSE10453	242883786	242884583	797	0
H3K4me3	colorectal	cancer	242883565	242884271	706	0
H3ac	HepG2	E	242883523	242886253	2730	0
H3ac	HepG2	E	242924353	242924646	293	0
PHF8	Hs68plusFBS	GSE20725	242882619	242884271	1652	0
TAF	k562	GSE8489	242883750	242885783	2033	0
hScc1	Bcell	GSE12603	242882598	242883786	1188	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
2607	mRNA	PNAS-4	chr1	241142414	241198373	1577	EST		chr1	241183419	241184996	Non-exonic Bidirectional (NOB) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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