Annotation Detail for SCCPDH
Basic Information Top
| Gene Symbol: | SCCPDH ( FLJ43187,NET11,RP11-439E19.2 ) |
|---|---|
| Gene Full Name: | saccharopine dehydrogenase (putative) |
| Band: | 1q44 |
| Quick Links | Entrez ID:51097; OMIM: NA; Uniprot ID:SCPDH_HUMAN; ENSEMBL ID: ENSG00000143653; HGNC ID: 24275 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylalanine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 171 | N-linked | HMM predict |
| 215 | N-linked | HMM predict |
| 218 | N-linked | HMM predict |
| 259 | Phosphothreonine(PKA) | HMM predict |
| 339 | O-linked | HMM predict |
| 346 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_016002
- Location:chr1 244954000-244998059
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 244939652 | 244939927 | 275 | 14211 |
| Fos | K562 | GSE19551 | 244942253 | 244942815 | 562 | 11467 |
| RARA | MCF7 | GSE15244 | 244939652 | 244939927 | 275 | 14211 |
| TFAP2C | MCF7 | GSE21234 | 244953651 | 244954168 | 517 | 91 |
| USF1 | HepG2 | E | 244939687 | 244939927 | 240 | 14194 |
| USF2 | HepG2 | E | 244939687 | 244939927 | 240 | 14194 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct4 | hES | GSE21916 | 244998295 | 244998767 | 472 | 472 |
| TFAP2C | MCF7 | GSE21234 | 245003264 | 245003780 | 516 | 5463 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 244983908 | 244984123 | 215 | 0 |
| CTCF | CD4 | SISSRdata | 244983908 | 244984123 | 215 | 0 |
| CTCF | G2 | GSE9613 | 244953861 | 244954674 | 813 | 0 |
| FoxA1 | MCF7 | MACSdata | 244956423 | 244956577 | 154 | 0 |
| H3K4me3 | colorectal | cancer | 244954960 | 244955834 | 874 | 0 |
| H3ac | HepG2 | E | 244954886 | 244955834 | 948 | 0 |
| H3ac | HepG2 | E | 244972746 | 244972988 | 242 | 0 |
| Myc | K562 | GSE19551 | 244978744 | 244979157 | 413 | 0 |
| PHF8 | HeLa | GSE20725 | 244953512 | 244955141 | 1629 | 0 |
| RARA | MCF7 | GSE15244 | 244994883 | 244995176 | 293 | 0 |
| Rb | Quiescent | GSE19898 | 244954587 | 244955074 | 487 | 0 |
| Rb | Senescent | GSE19898 | 244954686 | 244955028 | 342 | 0 |
| Rb | shRbQuiescent | GSE19898 | 244954322 | 244954509 | 187 | 0 |
| TAF | k562 | GSE8489 | 244954846 | 244955834 | 988 | 0 |
| TFAP2C | MCF7 | GSE21234 | 244965479 | 244965984 | 505 | 0 |
| TFAP2C | MCF7 | GSE21234 | 244978754 | 244979296 | 542 | 0 |
| hScc1 | Bcell | GSE12603 | 244953981 | 244954483 | 502 | 0 |
| hScc1 | G2 | GSE9613 | 244953861 | 244954638 | 777 | 0 |
| p130 | Quiescent | GSE19898 | 244954231 | 244954510 | 279 | 0 |
| p130 | shRbSenescent | GSE19898 | 244954255 | 244954586 | 331 | 0 |
| p130 | shRbSenescent | GSE19898 | 244954620 | 244955082 | 462 | 0 |
Validated miRNA targets