Annotation Detail for RDH11
Basic Information Top
| Gene Symbol: | RDH11 ( ARSDR1,CGI82,FLJ32633,HCBP12,MDT1,PSDR1,RALR1,SCALD,SDR7C1 ) |
|---|---|
| Gene Full Name: | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) |
| Band: | 14q24.1 |
| Quick Links | Entrez ID:51109; OMIM: 607849; Uniprot ID:RDH11_HUMAN; ENSEMBL ID: ENSG00000072042; HGNC ID: 17964 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 89 | Phosphothreonine. | |
| 112 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 174 | N-linked | HMM predict |
| 223 | O-linked | HMM predict |
| 298 | N-linked | HMM predict |
- RefSeq ID: NM_016026
- Location:chr14 67213270-67232212
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 67240903 | 67241239 | 336 | 8859 |
| CTCF | CD4 | SISSRdata | 67240903 | 67241239 | 336 | 8859 |
| CTCF | G2 | GSE9613 | 67241017 | 67241452 | 435 | 9022 |
| Fos | K562 | GSE19551 | 67237105 | 67237455 | 350 | 5068 |
| Myc | K562 | GSE19551 | 67240865 | 67241278 | 413 | 8859 |
| Nanog | hES | GSE18292 | 67240951 | 67241210 | 259 | 8868 |
| RARA | MCF7 | GSE15244 | 67240945 | 67241474 | 529 | 8997 |
| RARG | MCF7 | GSE15244 | 67240983 | 67241474 | 491 | 9016 |
| Rb | Senescent | GSE19898 | 67232268 | 67232436 | 168 | 140 |
| Sox2 | hES | GSE18292 | 67240811 | 67241470 | 659 | 8928 |
| TFAP2C | MCF7 | GSE21234 | 67231966 | 67232530 | 564 | 36 |
| hScc1 | Bcell | GSE12603 | 67240983 | 67241474 | 491 | 9016 |
| hScc1 | CdLS | GSE12603 | 67240490 | 67241474 | 984 | 8770 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 67231022 | 67232620 | 1598 | 0 |
| Fos | K562 | GSE19551 | 67231053 | 67231681 | 628 | 0 |
| H3K4me3 | colorectal | cancer | 67231423 | 67231782 | 359 | 0 |
| H3ac | HepG2 | E | 67230859 | 67232222 | 1363 | 0 |
| KLF4 | hES | GSE17917 | 67222284 | 67222692 | 408 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 67231730 | 67232409 | 679 | 0 |
| PHF8 | HeLa | GSE20725 | 67231543 | 67232374 | 831 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 67231239 | 67232601 | 1362 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 67231162 | 67232604 | 1442 | 0 |
| PolII | HeLa | GSE12783 | 67230969 | 67232504 | 1535 | 0 |
| RARA | MCF7 | GSE15244 | 67231458 | 67232256 | 798 | 0 |
| RARG | MCF7 | GSE15244 | 67231423 | 67232256 | 833 | 0 |
| Rb | Quiescent | GSE19898 | 67231965 | 67232346 | 381 | 0 |
| Rb | shRbSenescence | GSE19898 | 67232105 | 67232314 | 209 | 0 |
| TAF | Hela | GSE8489 | 67231423 | 67231901 | 478 | 0 |
| TAF | k562 | GSE8489 | 67231140 | 67231901 | 761 | 0 |
| p130 | shRbSenescent | GSE19898 | 67231904 | 67232440 | 536 | 0 |
Validated miRNA targets