AutismKB 2.0

Annotation Detail for RLIM


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Basic Information Top
Gene Symbol:RLIM ( DKFZp686N06224,FLJ25923,FLJ41093,FLJ42887,FLJ45986,MGC15161,NY-REN-43,RNF12 )
Gene Full Name: ring finger protein, LIM domain interacting
Band: Xq13.2
Quick LinksEntrez ID:51132; OMIM: 300379; Uniprot ID:RNF12_HUMAN; ENSEMBL ID: ENSG00000131263; HGNC ID: 13429
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
228Phosphoserine (By similarity).
230Phosphoserine (By similarity).
624PDZ-binding (Potential).
Location(AA) Modifications Resource
228Phosphoserine (By similarity).Swiss-Prot 53.0
230Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
33Phosphotyrosine(SRC)HMM predict
38N-linkedHMM predict
44SulfotyrosineHMM predict
44Phosphotyrosine(INSR)HMM predict
44Phosphotyrosine(SRC)HMM predict
59Phosphoserine(CK2)HMM predict
89Phosphoserine(ATM)HMM predict
93Phosphoserine(IKK)HMM predict
110N-linkedHMM predict
119N-linkedHMM predict
147N-linkedHMM predict
149Phosphoserine(ATM)HMM predict
151N-linkedHMM predict
163Phosphoserine(PKG)HMM predict
164Phosphoserine(PKG)HMM predict
164Phosphoserine(CK1)HMM predict
164Phosphoserine(PKB)HMM predict
170N-linkedHMM predict
171N-linkedHMM predict
181Phosphoserine(CK2)HMM predict
183Phosphoserine(PKB)HMM predict
185O-linkedHMM predict
194N-linkedHMM predict
195Phosphoserine(CK1)HMM predict
213Phosphoserine(PKG)HMM predict
230PhosphoserineHMM predict
230Phosphoserine(CDC2)HMM predict
230Phosphoserine(CDK)HMM predict
230Phosphoserine(ATM)HMM predict
230Phosphoserine(IKK)HMM predict
245Phosphoserine(IKK)HMM predict
257N-linkedHMM predict
265Phosphothreonine(PKC)HMM predict
270Phosphothreonine(PKA)HMM predict
295Phosphoserine(ATM)HMM predict
306O-linkedHMM predict
306Phosphoserine(CK2)HMM predict
312O-linkedHMM predict
345Phosphoserine(IKK)HMM predict
347Phosphoserine(ATM)HMM predict
347Phosphoserine(IKK)HMM predict
349Phosphothreonine(MAPK)HMM predict
349Phosphothreonine(CDC2)HMM predict
349Phosphothreonine(CDK)HMM predict
351N-linkedHMM predict
352N-linkedHMM predict
398O-linkedHMM predict
399Phosphoserine(IKK)HMM predict
424Phosphoserine(ATM)HMM predict
426Phosphoserine(IKK)HMM predict
426O-linkedHMM predict
426Phosphoserine(CK1)HMM predict
442Phosphoserine(PKG)HMM predict
455Phosphoserine(ATM)HMM predict
476Phosphoserine(CDC2)HMM predict
478Phosphoserine(CK1)HMM predict
480Phosphoserine(CK1)HMM predict
481Phosphoserine(IKK)HMM predict
481Phosphoserine(CK1)HMM predict
486O-linkedHMM predict
500Phosphoserine(CK1)HMM predict
503O-linkedHMM predict
503Phosphoserine(ATM)HMM predict
604N-linkedHMM predict
611ArginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016120
  • Location:chrX 73726770-73751167
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 73725072 73725108 36 1681
No data
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018