AutismKB 2.0

Annotation Detail for PCNT


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Basic Information Top
Gene Symbol:PCNT ( KEN,MOPD2,PCN,PCNT2,PCNTB,PCTN2,SCKL4 )
Gene Full Name: pericentrin
Band: 21q22.3
Quick LinksEntrez ID:5116; OMIM: 605925; Uniprot ID:PCNT_HUMAN; ENSEMBL ID: ENSG00000160299; HGNC ID: 16068
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
54Phosphoserine.
366Phosphoserine (By similarity).
1688Phosphoserine.
1703Phosphoserine.
1712Phosphoserine (By similarity).
2044Phosphoserine.
2177Phosphoserine.
2327Phosphoserine.
2900Phosphoserine.
2963Phosphoserine.
3274Phosphoserine.
Location(AA) Modifications Resource
1703Phosphoserine.Swiss-Prot 53.0
1703PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
34Phosphoserine(CK1)HMM predict
38Phosphothreonine(PKC)HMM predict
44Phosphoserine(PKG)HMM predict
78Phosphothreonine(CDC2)HMM predict
191Phosphothreonine(CDC2)HMM predict
191Phosphothreonine(MAPK)HMM predict
191Phosphothreonine(CDK)HMM predict
228Phosphoserine(CK2)HMM predict
239Phosphoserine(ATM)HMM predict
366Phosphoserine(PKA)HMM predict
371Phosphoserine(CK2)HMM predict
463Phosphoserine(CK2)HMM predict
463Phosphoserine(ATM)HMM predict
472Phosphoserine(IKK)HMM predict
479Phosphothreonine(PKC)HMM predict
480Phosphoserine(PKG)HMM predict
514Phosphoserine(CK2)HMM predict
644Phosphoserine(ATM)HMM predict
644Phosphoserine(IKK)HMM predict
703Phosphotyrosine(INSR)HMM predict
780Phosphoserine(CK1)HMM predict
813Phosphoserine(CK1)HMM predict
829Phosphothreonine(CK2)HMM predict
970Phosphoserine(IKK)HMM predict
1090Phosphoserine(CK1)HMM predict
1092Phosphoserine(CK1)HMM predict
1121Phosphoserine(CK1)HMM predict
1178Phosphothreonine(PKC)HMM predict
1223Phosphoserine(CK2)HMM predict
1398Phosphothreonine(CK2)HMM predict
1441Phosphoserine(CK2)HMM predict
1448Phosphoserine(CK1)HMM predict
1448Phosphoserine(ATM)HMM predict
1520Phosphoserine(ATM)HMM predict
1630O-linkedHMM predict
1630Phosphoserine(IKK)HMM predict
1632O-linkedHMM predict
1703Phosphoserine(CK1)HMM predict
1766Phosphoserine(ATM)HMM predict
1766Phosphoserine(IKK)HMM predict
1778Phosphoserine(ATM)HMM predict
1814Phosphoserine(PKA)HMM predict
1814Phosphoserine(PKG)HMM predict
1814Phosphoserine(CAMK2)HMM predict
1814Phosphoserine(IKK)HMM predict
1956Phosphothreonine(PKA)HMM predict
2044Phosphoserine(PKG)HMM predict
2044Phosphoserine(CK1)HMM predict
2123Phosphoserine(ATM)HMM predict
2153N-linkedHMM predict
2155Phosphothreonine(CDC2)HMM predict
2155Phosphothreonine(MAPK)HMM predict
2195Phosphoserine(IKK)HMM predict
2204Phosphoserine(PKA)HMM predict
2214Phosphoserine(CDC2)HMM predict
2223Phosphoserine(IKK)HMM predict
2245Phosphothreonine(CDC2)HMM predict
2267Phosphoserine(IKK)HMM predict
2279Phosphoserine(MAPK)HMM predict
2279Phosphoserine(ATM)HMM predict
2321O-linkedHMM predict
2326O-linkedHMM predict
2327O-linkedHMM predict
2327Phosphoserine(CDC2)HMM predict
2327Phosphoserine(MAPK)HMM predict
2350MethylarginineHMM predict
2355O-linkedHMM predict
2367O-linkedHMM predict
2367Phosphothreonine(MAPK)HMM predict
2417O-linkedHMM predict
2516Phosphoserine(CK1)HMM predict
2519Phosphoserine(CK1)HMM predict
2554Phosphoserine(ATM)HMM predict
2569Phosphotyrosine(Jak)HMM predict
2586Phosphoserine(CK1)HMM predict
2620Phosphoserine(IKK)HMM predict
2681Phosphoserine(ATM)HMM predict
2693Phosphoserine(PKG)HMM predict
2693Phosphoserine(CK1)HMM predict
2738Phosphoserine(ATM)HMM predict
2784Phosphothreonine(PKA)HMM predict
2818Phosphoserine(ATM)HMM predict
2842Phosphothreonine(PKC)HMM predict
2852Phosphothreonine(PKC)HMM predict
2937Phosphothreonine(PKC)HMM predict
2963Phosphoserine(CK2)HMM predict
2991Phosphoserine(IKK)HMM predict
3031Phosphoserine(CDC2)HMM predict
3031Phosphoserine(CDK)HMM predict
3032Phosphoserine(ATM)HMM predict
3074Phosphoserine(PKG)HMM predict
3089Phosphoserine(CDC2)HMM predict
3242Phosphoserine(CDC2)HMM predict
3242Phosphoserine(IKK)HMM predict
3242Phosphoserine(MAPK)HMM predict
3246Phosphothreonine(PKC)HMM predict
3249Phosphoserine(CDC2)HMM predict
3249Phosphoserine(CDK)HMM predict
3277O-linkedHMM predict
3282Phosphothreonine(MAPK)HMM predict
3284Phosphoserine(CDK)HMM predict
3296Phosphoserine(ATM)HMM predict
3302Phosphoserine(CK1)HMM predict
3324O-linkedHMM predict
3326Phosphoserine(IKK)HMM predict
3330CysteineHMM predict
3330S-farnesylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006031
  • Location:chr21 46568482-46690108
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FoxA1 MCF7MACSdata 46568336 46568603 267 13
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 46670119 46670261 142 0
CTCF CD4SISSRdata 46670119 46670261 142 0
CTCF G2GSE9613 46590415 46590671 256 0
CTCF G2GSE9613 46599982 46600538 556 0
CTCF G2GSE9613 46647810 46648344 534 0
CTCF G2GSE9613 46668483 46668700 217 0
FOXA1 MCF7GSE15244 46570578 46571019 441 0
Fos K562GSE19551 46567843 46569306 1463 0
H3ac HepG2E 46569776 46570578 802 0
NFkBII GM12878GSE19485 46615230 46616558 1328 0
NFkBII GM12892GSE19485 46567501 46570003 2502 0
NFkBII GM12892GSE19485 46615504 46616511 1007 0
NFkBII GM15510GSE19485 46566884 46570138 3254 0
NFkBII GM18505GSE19485 46615408 46616541 1133 0
NFkBII GM18526GSE19485 46615603 46616633 1030 0
Nanog hESGSE18292 46626035 46626220 185 0
PHF8 293TGSE20725 46567519 46570066 2547 0
RARA MCF7GSE15244 46626086 46629265 3179 0
RARG MCF7GSE15244 46626086 46629265 3179 0
Rb shRbSenescenceGSE19898 46591230 46591405 175 0
Sox2 hESGSE18292 46626000 46626220 220 0
TAF k562GSE8489 46569853 46570474 621 0
TAF k562GSE8489 46571921 46572562 641 0
TFAP2C MCF7GSE21234 46570472 46570941 469 0
hScc1 BcellGSE12603 46568186 46569408 1222 0
hScc1 BcellGSE12603 46578801 46579095 294 0
hScc1 BcellGSE12603 46590415 46590955 540 0
hScc1 BcellGSE12603 46615882 46616094 212 0
hScc1 BcellGSE12603 46648091 46648377 286 0
hScc1 BcellGSE12603 46655989 46656692 703 0
hScc1 BcellGSE12603 46658710 46659252 542 0
hScc1 BcellGSE12603 46660377 46660598 221 0
hScc1 BcellGSE12603 46660973 46661315 342 0
hScc1 BcellGSE12603 46664259 46664530 271 0
hScc1 BcellGSE12603 46670683 46671126 443 0
hScc1 CdLSGSE12603 46568255 46569853 1598 0
p130 QuiescentGSE19898 46629126 46629383 257 0
p63 keratinocytesGSE17611 46622113 46622808 695 0
p63 keratinocytesGSE17611 46657453 46658252 799 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
17080 mRNA PCNT2 chr21 46568482 46690106 142 HTC chr21 46567352 46568852Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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