Annotation Detail for RSL24D1
Basic Information Top
| Gene Symbol: | RSL24D1 ( C15orf15,HRP-L30-iso,L30,RLP24,RPL24,RPL24L,TVAS3 ) |
|---|---|
| Gene Full Name: | ribosomal L24 domain containing 1 |
| Band: | 15q21.3 |
| Quick Links | Entrez ID:51187; OMIM: 613262; Uniprot ID:RLP24_HUMAN; ENSEMBL ID: ENSG00000137876; HGNC ID: 18479 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 32 | S-palmitoyl | HMM predict |
| 36 | S-palmitoyl | HMM predict |
| 87 | N-linked | HMM predict |
- RefSeq ID: NM_016304
- Location:chr15 53260812-53276522
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| GABP | k562 | GSE8489 | 53277757 | 53278188 | 431 | 1450 |
| GABP | k562 | GSE8489 | 53278592 | 53279008 | 416 | 2278 |
| Nanog | ES | GSE20650 | 53276357 | 53276818 | 461 | 65 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 53247871 | 53248074 | 203 | 12840 |
| Oct1 | Hela | GSE14283 | 53254550 | 53254592 | 42 | 6242 |
| hScc1 | Bcell | GSE12603 | 53247871 | 53248074 | 203 | 12840 |
| hScc1 | CdLS | GSE12603 | 53247510 | 53248074 | 564 | 13021 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 53276195 | 53276363 | 168 | 0 |
| ETS1 | Jurkat | GSE17954 | 53275856 | 53277108 | 1252 | 0 |
| GABP | Hela | GSE8489 | 53274840 | 53276519 | 1679 | 0 |
| GABP | k562 | GSE8489 | 53274035 | 53277003 | 2968 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 53274549 | 53275871 | 1322 | 0 |
| H3K4me3 | colorectal | cancer | 53274662 | 53276482 | 1820 | 0 |
| H3ac | HepG2 | E | 53274549 | 53276623 | 2074 | 0 |
| Myc | hES | GSE17917 | 53276194 | 53276539 | 345 | 0 |
| Oct1 | Hela | GSE14283 | 53273758 | 53273786 | 28 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 53275838 | 53276909 | 1071 | 0 |
| PHF8 | 293T | GSE20725 | 53275815 | 53276968 | 1153 | 0 |
| PHF8 | HeLa | GSE20725 | 53275695 | 53277190 | 1495 | 0 |
| TAF | Hela | GSE8489 | 53274549 | 53277409 | 2860 | 0 |
| TAF | k562 | GSE8489 | 53274662 | 53276363 | 1701 | 0 |
| TFAP2C | MCF7 | GSE21234 | 53276136 | 53276901 | 765 | 0 |
| hScc1 | Bcell | GSE12603 | 53276074 | 53276587 | 513 | 0 |
| p130 | shRbQuiescent | GSE19898 | 53275908 | 53276802 | 894 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8845 | EST | chr15 | 53260803 | 53261204 | 399 | mRNA | C15orf15 | chr15 | 53260805 | 53276523 | Sense/Antisense (SA) pairs | |