Annotation Detail for SLC15A3

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Basic Information Top

Gene Symbol:	SLC15A3 ( FLJ26631,OCTP,PHT2,PTR3 )
Gene Full Name:	solute carrier family 15, member 3
Band:	11q12.2
Quick Links	Entrez ID:51296; OMIM: 610408; Uniprot ID:S15A3_HUMAN; ENSEMBL ID: ENSG00000110446; HGNC ID: 18068
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:6 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
61	N-linked (GlcNAc...) (Potential).
66	N-linked (GlcNAc...) (Potential).
178	N-linked (GlcNAc...) (Potential).
223	N-linked (GlcNAc...) (Potential).
356	N-linked (GlcNAc...) (Potential).
439	N-linked (GlcNAc...) (Potential).

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_016582
Location:chr11 60461135-60475832
strand:-

Upstream the gene:6 results
Downstream the gene:0 results
Inside the gene:7 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
NRSF	pAb	Jurkat	60476014	60476243	229	296
TFAP2C	MCF7	GSE21234	60483435	60484023	588	7897
p130	Quiescent	GSE19898	60475826	60476453	627	307
p130	Senescent	GSE19898	60475683	60476395	712	207
p130	shRbQuiescent	GSE19898	60475740	60476757	1017	416
p130	shRbSenescent	GSE19898	60475627	60476844	1217	403

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	60469011	60469106	95	0
CTCF	CD4	SISSRdata	60469011	60469106	95	0
FOXA1	MCF7	GSE15244	60470609	60471192	583	0
TFAP2C	MCF7	GSE21234	60465647	60467150	1503	0
TFAP2C	MCF7	GSE21234	60467164	60467688	524	0
hScc1	Bcell	GSE12603	60465126	60465336	210	0
hScc1	Bcell	GSE12603	60475376	60475649	273	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
4572	mRNA	HSPA5BP1	chr11	60448521	60461206	71	mRNA	SLC15A3	chr11	60461135	60475833	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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