AutismKB 2.0

Annotation Detail for CYP39A1


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Basic Information Top
Gene Symbol:CYP39A1 ( - )
Gene Full Name: cytochrome P450, family 39, subfamily A, polypeptide 1
Band: 6p12.3
Quick LinksEntrez ID:51302; OMIM: 605994; Uniprot ID:CP39A_HUMAN; ENSEMBL ID: ENSG00000146233; HGNC ID: 17449
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
14S-palmitoylHMM predict
31S-palmitoylHMM predict
106Phosphoserine(PKB)HMM predict
176N-linkedHMM predict
193SulfotyrosineHMM predict
197Phosphotyrosine(Syk)HMM predict
205Phosphoserine(ATM)HMM predict
258Phosphothreonine(CK2)HMM predict
259Phosphoserine(CK1)HMM predict
409Phosphoserine(CDK)HMM predict
448Phosphotyrosine(Jak)HMM predict
455ProlineHMM predict
461S-farnesylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016593
  • Location:chr6 46625404-46728481
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 46606166 46606194 28 19225
Oct1 H2O2-HelaGSE14283 46621777 46621805 28 3614
Oct1 HelaGSE14283 46621768 46621805 37 3618
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 46702086 46702299 213 0
CTCF CD4SISSRdata 46702086 46702299 213 0
GABP k562GSE8489 46631524 46631747 223 0
H3K4me2 HCT116GSE10453 46727975 46728480 505 0
H3K4me3 colorectalcancer 46727381 46727802 421 0
H3ac HepG2E 46725426 46725705 279 0
H3ac HepG2E 46727729 46728551 822 0
PAX3-FKHR Rh4GSE19063 46658651 46660060 1409 0
TFAP2C MCF7GSE21234 46714337 46714621 284 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018