AutismKB 2.0

Annotation Detail for PDE1C


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Basic Information Top
Gene Symbol:PDE1C ( Hcam3 )
Gene Full Name: phosphodiesterase 1C, calmodulin-dependent 70kDa
Band: 7p14.3
Quick LinksEntrez ID:5137; OMIM: 602987; Uniprot ID:PDE1C_HUMAN; ENSEMBL ID: ENSG00000154678; HGNC ID: 8776
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
3Phosphoserine.
469Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
86Phosphothreonine(CK2)HMM predict
91Phosphoserine(CK2)HMM predict
91Phosphoserine(CK1)HMM predict
144Phosphotyrosine(EGFR)HMM predict
270SulfotyrosineHMM predict
320N-linkedHMM predict
391Phosphothreonine(PKA)HMM predict
421Phosphothreonine(PKA)HMM predict
469Phosphoserine(CK1)HMM predict
469Phosphoserine(PKA)HMM predict
469Phosphoserine(PKB)HMM predict
472Phosphoserine(IKK)HMM predict
486Phosphoserine(PKG)HMM predict
488O-linkedHMM predict
495N-linkedHMM predict
496N-linkedHMM predict
554Phosphoserine(ATM)HMM predict
561Phosphoserine(CK2)HMM predict
569Phosphoserine(CK2)HMM predict
577N-linkedHMM predict
582N-linkedHMM predict
586N-linkedHMM predict
592Phosphoserine(PKG)HMM predict
598Phosphoserine(CK1)HMM predict
612N-linkedHMM predict
624N-linkedHMM predict
639Phosphoserine(CDC2)HMM predict
639O-linkedHMM predict
643O-linkedHMM predict
644O-linkedHMM predict
645O-linkedHMM predict
647O-linkedHMM predict
671O-linkedHMM predict
694IsoleucineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005020
  • Location:chr7 31795772-32077515
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 32084611 32084742 131 7161
FoxA1 MCF7MACSdata 32084275 32084482 207 6863
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 31784232 31784514 282 11400
hScc1 BcellGSE12603 31788602 31788815 213 7064
hScc1 CdLSGSE12603 31788602 31788815 213 7064
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 31978928 31979171 243 0
CTCF G2GSE9613 32067524 32067803 279 0
CTCF G2GSE9613 32068158 32068612 454 0
CTCF G2GSE9613 32076400 32077221 821 0
ER Fulvestrant-MCF7GSE14664 32061141 32061221 80 0
FOXA1 MCF7GSE15244 31993241 31993779 538 0
FOXA1 MCF7GSE15244 32045013 32045860 847 0
FOXA1 MCF7GSE15244 32049350 32050581 1231 0
FoxA1 MCF7MACSdata 31867152 31867303 151 0
FoxA1 MCF7MACSdata 32045030 32045811 781 0
H3K27me3 colorectalcancer 32074593 32076953 2360 0
Nanog hESGSE18292 31899774 31900062 288 0
Oct1 H2O2-HelaGSE14283 31835021 31835057 36 0
Oct1 H2O2-HelaGSE14283 31985927 31985979 52 0
Oct1 HelaGSE14283 31835022 31835060 38 0
Oct1 HelaGSE14283 31985927 31985977 50 0
Oct1 HelaGSE14283 31990745 31990773 28 0
Oct1 HelaGSE14283 32061180 32061219 39 0
Oct4 hESGSE17917 32070998 32071250 252 0
Rb shRbSenescenceGSE19898 31901158 31901467 309 0
hScc1 BcellGSE12603 32076878 32077184 306 0
hScc1 CdLSGSE12603 31898255 31898721 466 0
hScc1 CdLSGSE12603 32067943 32068612 669 0
p63 keratinocytesGSE17611 31896083 31896795 712 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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