AutismKB 2.0

Annotation Detail for SCARA3


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Basic Information Top
Gene Symbol:SCARA3 ( APC7,CSR,CSR1,MSLR1,MSRL1 )
Gene Full Name: scavenger receptor class A, member 3
Band: 8p21.1
Quick LinksEntrez ID:51435; OMIM: 602728; Uniprot ID:SCAR3_HUMAN; ENSEMBL ID: ENSG00000168077; HGNC ID: 19000
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
115N-linked (GlcNAc...) (Potential).
182N-linked (GlcNAc...) (Potential).
224N-linked (GlcNAc...) (Potential).
257N-linked (GlcNAc...) (Potential).
313N-linked (GlcNAc...) (Potential).
337N-linked (GlcNAc...) (Potential).
365N-linked (GlcNAc...) (Potential).
400N-linked (GlcNAc...) (Potential).
430N-linked (GlcNAc...) (Potential).
451N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
115N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
182N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
224N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
257N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
313N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
337N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
365N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
400N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
430N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
451N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
50Phosphoserine(CK1)HMM predict
84Phosphoserine(CK1)HMM predict
88Phosphoserine(CK1)HMM predict
115N-linkedHMM predict
168Phosphoserine(PKG)HMM predict
224N-linkedHMM predict
257N-linkedHMM predict
287Phosphoserine(ATM)HMM predict
291Phosphoserine(ATM)HMM predict
313N-linkedHMM predict
337N-linkedHMM predict
365N-linkedHMM predict
369N-linkedHMM predict
451N-linkedHMM predict
468O-linkedHMM predict
474O-linkedHMM predict
483O-linkedHMM predict
488O-linkedHMM predict
516MethylarginineHMM predict
522O-linkedHMM predict
524O-linkedHMM predict
525O-linkedHMM predict
534MethylarginineHMM predict
540O-linkedHMM predict
554Phosphoserine(CDC2)HMM predict
554Phosphoserine(ATM)HMM predict
554PhosphoserineHMM predict
554O-linkedHMM predict
558O-linkedHMM predict
558Phosphoserine(ATM)HMM predict
558O-linkedHMM predict
570O-linkedHMM predict
572Phosphoserine(CDC2)HMM predict
576MethylarginineHMM predict
582O-linkedHMM predict
594ProlineHMM predict
599ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016240
  • Location:chr8 27547495-27586455
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 27546859 27547109 250 512
ER E2-MCF7GSE14664 27542074 27542108 34 5405
H3K27me3 colorectalcancer 27546821 27547082 261 544
Oct1 HelaGSE14283 27538229 27538302 73 9230
Oct1 HelaGSE14283 27539391 27539429 38 8086
Oct1 HelaGSE14283 27543911 27543946 35 3567
Rb GrowingGSE19898 27547191 27547338 147 231
Rb SenescentGSE19898 27547044 27547363 319 292
Rb shRbSenescenceGSE19898 27547151 27547323 172 259
Sox2 hESGSE18292 27538275 27538430 155 9143
p130 QuiescentGSE19898 27547115 27547353 238 262
p130 SenescentGSE19898 27546963 27547372 409 328
p130 shRbSenescentGSE19898 27547098 27547348 250 273
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 27550753 27551575 822 0
CTCF G2GSE9613 27563746 27563884 138 0
CTCF G2GSE9613 27580111 27580587 476 0
CTCF G2GSE9613 27581065 27581435 370 0
CTCF G2GSE9613 27582294 27583213 919 0
CTCF G2GSE9613 27584206 27584747 541 0
CTCF G2GSE9613 27585273 27585423 150 0
CTCF G2GSE9613 27585916 27586205 289 0
NRSF pAbJurkat 27549364 27550171 807 0
NRSF pAbJurkat 27550541 27550934 393 0
NRSF pAbJurkat 27585273 27586132 859 0
Nanog hESGSE18292 27560707 27560919 212 0
TFAP2C MCF7GSE21234 27580276 27580874 598 0
hScc1 BcellGSE12603 27550505 27551430 925 0
hScc1 BcellGSE12603 27580771 27581364 593 0
hScc1 CdLSGSE12603 27547436 27547675 239 0
p130 QuiescentGSE19898 27547687 27548018 331 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-155 hsa-mir-155 21 18450484
hsa-miR-155* hsa-mir-155 21 18450484
hsa-miR-181b hsa-mir-181b-1 1 18762567
hsa-miR-181b hsa-mir-181b-2 9 18762567
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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