AutismKB 2.0

Annotation Detail for VCX2


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Basic Information Top
Gene Symbol:VCX2 ( MGC118977,MGC125729,MGC125794,MGC125795,VCX-2r,VCX2R,VCXB )
Gene Full Name: variable charge, X-linked 2
Band: Xp22.31
Quick LinksEntrez ID:51480; OMIM: 300532; Uniprot ID:VCX2_HUMAN; ENSEMBL ID: ENSG00000177504; HGNC ID: 18158
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
8O-linkedHMM predict
22PhosphoserineHMM predict
23Phosphoserine(PKG)HMM predict
23Phosphoserine(CK2)HMM predict
23O-linkedHMM predict
23Phosphoserine(PKA)HMM predict
24Phosphoserine(IKK)HMM predict
24Phosphoserine(ATM)HMM predict
27Phosphoserine(IKK)HMM predict
29Phosphoserine(ATM)HMM predict
36Phosphothreonine(PKA)HMM predict
36Phosphothreonine(PKC)HMM predict
47MethylarginineHMM predict
53O-linkedHMM predict
77O-linkedHMM predict
77Phosphoserine(ATM)HMM predict
81Phosphoserine(ATM)HMM predict
81Phosphoserine(IKK)HMM predict
105Phosphoserine(ATM)HMM predict
115Phosphoserine(CK2)HMM predict
115Phosphoserine(ATM)HMM predict
118Phosphoserine(CK2)HMM predict
135Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016378
  • Location:chrX 8097985-8099307
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 8118905 8119457 552 19874
FoxA1 MCF7MACSdata 8119050 8119355 305 19895
RARA MCF7GSE15244 8118110 8119400 1290 19448
RARG MCF7GSE15244 8118110 8119457 1347 19476
TFAP2C MCF7GSE21234 8118926 8119610 684 19961
No data
No data
Validated miRNA targets Top
Cis-Nats regulation Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018