AutismKB 2.0

Annotation Detail for VCX3A


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Basic Information Top
Gene Symbol:VCX3A ( MGC118976,MGC125730,MGC125796,VCX-8r,VCX-A,VCX3,VCX8R,VCXA )
Gene Full Name: variable charge, X-linked 3A
Band: Xp22.31
Quick LinksEntrez ID:51481; OMIM: 300533; Uniprot ID:VCX3_HUMAN; ENSEMBL ID: ENSG00000169059; HGNC ID: 18159
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
8O-linkedHMM predict
22PhosphoserineHMM predict
23Phosphoserine(PKA)HMM predict
23Phosphoserine(CK2)HMM predict
23O-linkedHMM predict
23Phosphoserine(PKG)HMM predict
24Phosphoserine(IKK)HMM predict
24Phosphoserine(ATM)HMM predict
27Phosphoserine(IKK)HMM predict
29Phosphoserine(ATM)HMM predict
36Phosphothreonine(PKA)HMM predict
36Phosphothreonine(PKC)HMM predict
47MethylarginineHMM predict
53O-linkedHMM predict
77Phosphoserine(ATM)HMM predict
77O-linkedHMM predict
81Phosphoserine(ATM)HMM predict
81Phosphoserine(IKK)HMM predict
105Phosphoserine(ATM)HMM predict
108Phosphoserine(CK2)HMM predict
115Phosphoserine(CK2)HMM predict
115Phosphoserine(ATM)HMM predict
118Phosphoserine(CK2)HMM predict
125Phosphoserine(IKK)HMM predict
125Phosphoserine(ATM)HMM predict
125Phosphoserine(CK1)HMM predict
128Phosphoserine(CK2)HMM predict
135Phosphoserine(CK2)HMM predict
135Phosphoserine(ATM)HMM predict
138Phosphoserine(CK2)HMM predict
145Phosphoserine(ATM)HMM predict
145Phosphoserine(CK1)HMM predict
145Phosphoserine(IKK)HMM predict
148Phosphoserine(CK2)HMM predict
155Phosphoserine(CK2)HMM predict
155Phosphoserine(ATM)HMM predict
158Phosphoserine(CK2)HMM predict
165Phosphoserine(IKK)HMM predict
165Phosphoserine(CK1)HMM predict
165Phosphoserine(ATM)HMM predict
168Phosphoserine(CK2)HMM predict
175Phosphoserine(CK2)HMM predict
175Phosphoserine(ATM)HMM predict
178Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016379
  • Location:chrX 6461659-6463158
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 6482019 6482051 32 18877
No data
No data
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018