AutismKB 2.0

Annotation Detail for PDE9A


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Basic Information Top
Gene Symbol:PDE9A ( FLJ90181,HSPDE9A2 )
Gene Full Name: phosphodiesterase 9A
Band: 21q22.3
Quick LinksEntrez ID:5152; OMIM: 602973; Uniprot ID:PDE9A_HUMAN; ENSEMBL ID: ENSG00000160191; HGNC ID: 8795
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
29Phosphotyrosine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
14Phosphotyrosine(Syk)HMM predict
31N-linkedHMM predict
48N-linkedHMM predict
74Phosphothreonine(CDC2)HMM predict
76Phosphotyrosine(Syk)HMM predict
96Phosphothreonine(PKA)HMM predict
235Phosphothreonine(MAPK)HMM predict
235Phosphothreonine(CDK)HMM predict
338Phosphoserine(ATM)HMM predict
338Phosphoserine(CK1)HMM predict
359Phosphotyrosine(Syk)HMM predict
360N-linkedHMM predict
361N-linkedHMM predict
366N-linkedHMM predict
444Phosphotyrosine(INSR)HMM predict
444SulfotyrosineHMM predict
550Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001001567
  • Location:chr21 42946930-43068684
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 42945521 42946015 494 1163
KLF4 hESGSE17917 42934396 42934557 161 12454
Oct4 hESGSE17917 42934397 42934784 387 12340
RARA MCF7GSE15244 42937386 42937531 145 9472
SRF HelaGSE8489 42930690 42931017 327 16077
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 43074524 43074977 453 6066
RARG MCF7GSE15244 43074348 43074710 362 5845
Rb shRbQuiescentGSE19898 43088081 43088332 251 19522
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 43017112 43018144 1032 0
CTCF G2GSE9613 42982012 42982390 378 0
CTCF G2GSE9613 42983152 42983411 259 0
CTCF G2GSE9613 42983904 42984110 206 0
CTCF G2GSE9613 42999051 42999348 297 0
CTCF G2GSE9613 43059032 43059214 182 0
FOXA1 MCF7GSE15244 42964968 42966855 1887 0
FOXA1 MCF7GSE15244 43027387 43027724 337 0
KLF4 hESGSE17917 42968494 42968667 173 0
KLF4 hESGSE17917 43030251 43030504 253 0
Nanog hESGSE18292 43000613 43001239 626 0
P300 T30-glioblastomaGSE21026 42977745 42978314 569 0
P300 T30-glioblastomaGSE21026 43017172 43018209 1037 0
RARG MCF7GSE15244 42965883 42966932 1049 0
RARG MCF7GSE15244 43017659 43018104 445 0
RARG MCF7GSE15244 43039866 43040089 223 0
Rb QuiescentGSE19898 42956039 42956148 109 0
Sox2 hESGSE18292 42960540 42960939 399 0
Sox2 hESGSE18292 43000665 43001220 555 0
TFAP2C MCF7GSE21234 42977652 42978095 443 0
TFAP2C MCF7GSE21234 43056843 43057321 478 0
hScc1 BcellGSE12603 42958764 42959099 335 0
hScc1 BcellGSE12603 42979213 42979584 371 0
hScc1 BcellGSE12603 42981827 42982517 690 0
hScc1 BcellGSE12603 42997021 42997540 519 0
hScc1 BcellGSE12603 43038541 43039027 486 0
hScc1 BcellGSE12603 43060785 43061174 389 0
hScc1 BcellGSE12603 43062973 43063247 274 0
hScc1 BcellGSE12603 43065170 43065529 359 0
p130 shRbQuiescentGSE19898 43017307 43017810 503 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
17001 mRNA PDE9A chr21 42946930 43068685 62 EST chr21 43068623 43068997Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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