AutismKB 2.0

Annotation Detail for CXXC5


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Basic Information Top
Gene Symbol:CXXC5 ( CF5,RINF,WID )
Gene Full Name: CXXC finger protein 5
Band: 5q31.2
Quick LinksEntrez ID:51523; OMIM: 612752; Uniprot ID:CXXC5_HUMAN; ENSEMBL ID: ENSG00000171604; HGNC ID: 26943
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_016463
  • Location:chr5 139008129-139043648
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 138999679 138999951 272 8315
CTCF G2GSE9613 139006713 139006898 185 1324
ER MCF7GSE19013 138997734 138998600 866 9963
ER MCF7GSE19013 139002600 139004531 1931 4564
RARA MCF7GSE15244 139002514 139003920 1406 4913
Rb SenescentGSE19898 139007883 139008170 287 103
TFAP2C MCF7GSE21234 138997831 138998682 851 9873
TFAP2C MCF7GSE21234 139002401 139004327 1926 4766
hScc1 BcellGSE12603 138998499 138999063 564 9349
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF JurkatGSE12889 139049961 139050174 213 6419
CTCF G2GSE9613 139044652 139045372 720 1364
CTCF G2GSE9613 139046549 139047062 513 3157
CTCF G2GSE9613 139047659 139048446 787 4404
CTCF G2GSE9613 139049360 139050180 820 6122
CTCF G2GSE9613 139052821 139053359 538 9442
CTCF G2GSE9613 139057016 139057655 639 13687
CTCF G2GSE9613 139059246 139059854 608 15902
Fos K562GSE19551 139059555 139060062 507 16160
Oct1 HelaGSE14283 139049595 139049621 26 5960
TFAP2C MCF7GSE21234 139056092 139056808 716 12802
USF1 HepG2E 139057986 139059854 1868 15272
USF1 HepG2E 139060311 139060992 681 17003
USF2 HepG2E 139058920 139059854 934 15739
hScc1 CdLSGSE12603 139049927 139050360 433 6495
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 139028823 139031320 2497 0
CTCF CD4GSE12889 139030527 139030656 129 0
CTCF CD4SISSRdata 139030527 139030656 129 0
CTCF HelaGSE12889 139030493 139030773 280 0
CTCF JurkatGSE12889 139030505 139030787 282 0
CTCF G2GSE9613 139007837 139008773 936 0
CTCF G2GSE9613 139014727 139015285 558 0
CTCF G2GSE9613 139015571 139015799 228 0
CTCF G2GSE9613 139017030 139017811 781 0
CTCF G2GSE9613 139019509 139020265 756 0
CTCF G2GSE9613 139020712 139021500 788 0
CTCF G2GSE9613 139022476 139022985 509 0
CTCF G2GSE9613 139024153 139025211 1058 0
CTCF G2GSE9613 139027942 139031263 3321 0
CTCF G2GSE9613 139033907 139034270 363 0
CTCF G2GSE9613 139035282 139035843 561 0
CTCF G2GSE9613 139036803 139037225 422 0
CTCF G2GSE9613 139037517 139038664 1147 0
CTCF G2GSE9613 139040043 139041055 1012 0
CTCF G2GSE9613 139041804 139042583 779 0
ER E2-MCF7GSE14664 139035296 139035329 33 0
ER MCF7GSE19013 139015294 139015820 526 0
ER MCF7GSE19013 139017663 139018495 832 0
Fos K562GSE19551 139020662 139021371 709 0
Gata1 K562GSE18868 139029606 139030200 594 0
Gata2 K562GSE18868 139029510 139030406 896 0
NFkBII GM12878GSE19485 139023337 139024938 1601 0
NFkBII GM12878GSE19485 139027305 139032076 4771 0
NFkBII GM18526GSE19485 139023385 139025067 1682 0
NRSF pAbJurkat 139036516 139037188 672 0
Nanog hESGSE18292 139043318 139043794 476 0
Oct1 H2O2-HelaGSE14283 139019658 139019689 31 0
Oct1 H2O2-HelaGSE14283 139035302 139035329 27 0
Oct1 HelaGSE14283 139012788 139012827 39 0
Oct1 HelaGSE14283 139035253 139035329 76 0
TFAP2C MCF7GSE21234 139015235 139016168 933 0
TFAP2C MCF7GSE21234 139019613 139021372 1759 0
TFAP2C MCF7GSE21234 139033621 139034263 642 0
USF1 HepG2E 139010357 139013049 2692 0
hScc1 BcellGSE12603 139007752 139009746 1994 0
hScc1 BcellGSE12603 139010147 139010672 525 0
hScc1 BcellGSE12603 139011787 139012204 417 0
hScc1 BcellGSE12603 139027908 139028421 513 0
hScc1 BcellGSE12603 139029962 139030876 914 0
hScc1 CdLSGSE12603 139007912 139010594 2682 0
hScc1 CdLSGSE12603 139029668 139030876 1208 0
hScc1 G2GSE9613 139007682 139009137 1455 0
p130 shRbQuiescentGSE19898 139019570 139020104 534 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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