Annotation Detail for ZC3HC1
Basic Information Top
| Gene Symbol: | ZC3HC1 ( 1110054L24Rik,FBXO50,NIPA ) |
|---|---|
| Gene Full Name: | zinc finger, C3HC-type containing 1 |
| Band: | 7q32.2 |
| Quick Links | Entrez ID:51530; OMIM: NA; Uniprot ID:NIPA_HUMAN; ENSEMBL ID: ENSG00000091732; HGNC ID: 29913 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylalanine. | |
| 24 | Phosphoserine. | |
| 28 | Phosphothreonine. | |
| 58 | Phosphoserine. | |
| 62 | Phosphoserine. | |
| 84 | Phosphothreonine. | |
| 321 | Phosphoserine. | |
| 333 | Phosphothreonine. | |
| 335 | Phosphoserine. | |
| 338 | Phosphoserine. | |
| 344 | Phosphoserine. | |
| 354 | Phosphoserine. | |
| 357 | Phosphoserine. | |
| 359 | Phosphoserine. | |
| 370 | Phosphoserine. | |
| 384 | Phosphothreonine. | |
| 387 | Phosphothreonine. | |
| 394 | Phosphoserine. | |
| 395 | Phosphoserine. | |
| 402 | Nuclear localization signal. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 24 | Phosphoserine. | Swiss-Prot 53.0 |
| 24 | Phosphoserine | Phospho.ELM 6.0 |
| 28 | Phosphothreonine. | Swiss-Prot 53.0 |
| 28 | Phosphothreonine | Phospho.ELM 6.0 |
| 62 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 62 | Phosphoserine | Phospho.ELM 6.0 |
| 105 | Phosphotyrosine (ALK) | Phospho.ELM 6.0 |
| 137 | Phosphotyrosine (ALK) | Phospho.ELM 6.0 |
| 321 | Phosphoserine. | Swiss-Prot 53.0 |
| 321 | Phosphoserine | Phospho.ELM 6.0 |
| 354 | Phosphoserine | Phospho.ELM 6.0 |
| 354 | Phosphoserine. | Swiss-Prot 53.0 |
| 370 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | Phosphoserine(CDC2) | HMM predict |
| 53 | Phosphoserine(IKK) | HMM predict |
| 56 | Phosphoserine(ATM) | HMM predict |
| 58 | Phosphoserine(IKK) | HMM predict |
| 60 | N-linked | HMM predict |
| 62 | Phosphoserine(CDC2) | HMM predict |
| 69 | Phosphoserine(IKK) | HMM predict |
| 73 | Phosphothreonine(CK2) | HMM predict |
| 161 | Phosphoserine(CDC2) | HMM predict |
| 254 | S-palmitoyl | HMM predict |
| 301 | O-linked | HMM predict |
| 303 | Phosphoserine(CDC2) | HMM predict |
| 321 | Phosphoserine(CDC2) | HMM predict |
| 327 | Phosphothreonine(PKA) | HMM predict |
| 329 | Phosphoserine(ATM) | HMM predict |
| 335 | Phosphoserine(MAPK) | HMM predict |
| 338 | Phosphoserine(CK2) | HMM predict |
| 354 | Phosphoserine(PKA) | HMM predict |
| 354 | Phosphoserine(PKB) | HMM predict |
| 354 | Phosphoserine(IKK) | HMM predict |
| 354 | Phosphoserine(CAMK2) | HMM predict |
| 370 | O-linked | HMM predict |
| 370 | Phosphoserine(CDC2) | HMM predict |
| 372 | Phosphothreonine(PKC) | HMM predict |
| 387 | Phosphothreonine(MAPK) | HMM predict |
| 395 | Phosphoserine(CDC2) | HMM predict |
| 395 | Phosphoserine(CDK) | HMM predict |
| 413 | O-linked | HMM predict |
| 423 | Phosphoserine(ATM) | HMM predict |
| 433 | N-linked | HMM predict |
| 440 | Phosphoserine(PKG) | HMM predict |
| 472 | Phosphoserine(ATM) | HMM predict |
| 479 | Phosphoserine(IKK) | HMM predict |
| 481 | Phosphoserine(CK1) | HMM predict |
- RefSeq ID: NM_016478
- Location:chr7 129445361-129478468
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| TFAP2C | MCF7 | GSE21234 | 129478170 | 129478776 | 606 | 5 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 129437976 | 129438221 | 245 | 7263 |
| CTCF | CD4 | SISSRdata | 129437976 | 129438221 | 245 | 7263 |
| CTCF | Hela | GSE12889 | 129438005 | 129438175 | 170 | 7272 |
| CTCF | Jurkat | GSE12889 | 129437938 | 129438289 | 351 | 7248 |
| CTCF | G2 | GSE9613 | 129437523 | 129438139 | 616 | 7531 |
| Nanog | hES | GSE18292 | 129437955 | 129438204 | 249 | 7282 |
| TAFII | hES | GSE17917 | 129438010 | 129438313 | 303 | 7200 |
| hScc1 | Bcell | GSE12603 | 129437624 | 129438139 | 515 | 7480 |
| hScc1 | CdLS | GSE12603 | 129437523 | 129438139 | 616 | 7531 |
| hScc1 | G2 | GSE9613 | 129437523 | 129438139 | 616 | 7531 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 129477886 | 129478880 | 994 | 0 |
| Fos | K562 | GSE19551 | 129452903 | 129453600 | 697 | 0 |
| GABP | k562 | GSE8489 | 129475978 | 129476600 | 622 | 0 |
| GABP | k562 | GSE8489 | 129478031 | 129478700 | 669 | 0 |
| H3K4me3 | colorectal | cancer | 129478031 | 129478330 | 299 | 0 |
| H3ac | HepG2 | E | 129478031 | 129478440 | 409 | 0 |
| Myc | K562 | GSE19551 | 129452886 | 129453536 | 650 | 0 |
| Myc | K562 | GSE19551 | 129478062 | 129478830 | 768 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 129477682 | 129478755 | 1073 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 129452718 | 129453707 | 989 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 129478068 | 129478821 | 753 | 0 |
| PolII | HeLa | GSE12783 | 129477825 | 129478871 | 1046 | 0 |
| STAT1 | HeLa | GSE12783 | 129452612 | 129453746 | 1134 | 0 |
| STAT1 | IFN | SISSRdata | 129452884 | 129453604 | 720 | 0 |
| TAF | Hela | GSE8489 | 129476929 | 129477115 | 186 | 0 |
| TAF | Hela | GSE8489 | 129478031 | 129478330 | 299 | 0 |
| TAF | k562 | GSE8489 | 129475978 | 129476600 | 622 | 0 |
| TAF | k562 | GSE8489 | 129478031 | 129478700 | 669 | 0 |
| TAFII | hES | GSE17917 | 129478028 | 129478681 | 653 | 0 |
| TFAP2C | MCF7 | GSE21234 | 129453017 | 129453390 | 373 | 0 |
| p130 | Quiescent | GSE19898 | 129478130 | 129478731 | 601 | 0 |
| p130 | Senescent | GSE19898 | 129478140 | 129478703 | 563 | 0 |
| p130 | shRbQuiescent | GSE19898 | 129477912 | 129478748 | 836 | 0 |
| p130 | shRbSenescent | GSE19898 | 129478106 | 129478731 | 625 | 0 |
Validated miRNA targets