AutismKB 2.0

Annotation Detail for PDGFRL


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Basic Information Top
Gene Symbol:PDGFRL ( PDGRL,PRLTS )
Gene Full Name: platelet-derived growth factor receptor-like
Band: 8p22
Quick LinksEntrez ID:5157; OMIM: 604584; Uniprot ID:PGFRL_HUMAN; ENSEMBL ID: ENSG00000104213; HGNC ID: 8805
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
132N-linked (GlcNAc...) (Potential).
219N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
132N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
219N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
118Phosphoserine(CK1)HMM predict
125Phosphotyrosine(EGFR)HMM predict
132N-linkedHMM predict
206Phosphothreonine(PKC)HMM predict
219N-linkedHMM predict
269O-linkedHMM predict
269O-linkedHMM predict
275O-linkedHMM predict
361AsparagineHMM predict
371Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_006207
  • Location:chr8 17478985-17544902
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 17478393 17479564 1171 7
FOXA1 MCF7GSE15244 17478393 17478639 246 470
hScc1 CdLSGSE12603 17478603 17479193 590 88
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 17504465 17504666 201 0
CTCF CD4SISSRdata 17504465 17504666 201 0
CTCF HelaGSE12889 17504463 17504667 204 0
CTCF G2GSE9613 17504352 17504730 378 0
FOXA1 DLD1GSE12801 17515960 17516325 365 0
FOXA1 DLD1GSE12801 17516866 17517018 152 0
FOXA1 MCF7GSE15244 17509918 17510689 771 0
FOXA1 MCF7GSE15244 17515960 17516325 365 0
FoxA1 MCF7MACSdata 17509999 17510304 305 0
FoxA1 MCF7MACSdata 17516105 17516342 237 0
GATA3 MCF7GSE15244 17509999 17510689 690 0
H3ac HepG2E 17536057 17536236 179 0
Myc hESGSE17917 17479299 17479612 313 0
P300 T0-glioblastomaGSE21026 17498306 17499103 797 0
RARA MCF7GSE15244 17512752 17513133 381 0
RARA MCF7GSE15244 17515998 17516325 327 0
RARG MCF7GSE15244 17510294 17510689 395 0
RARG MCF7GSE15244 17512752 17513103 351 0
Rb GrowingGSE19898 17504179 17504365 186 0
STAT1 HeLaGSE12783 17486220 17487317 1097 0
TFAP2C MCF7GSE21234 17510025 17510406 381 0
USF1 HepG2E 17516866 17517237 371 0
USF2 HepG2E 17516866 17517237 371 0
hScc1 BcellGSE12603 17478832 17479523 691 0
hScc1 BcellGSE12603 17504242 17504730 488 0
hScc1 CdLSGSE12603 17504242 17504730 488 0
hScc1 G2GSE9613 17478753 17479564 811 0
hScc1 G2GSE9613 17504242 17504730 488 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
25120 mRNA PDGFRL chr8 17478985 17544903 189 EST chr8 17544259 17545468Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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