AutismKB 2.0

Annotation Detail for KLF13


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Basic Information Top
Gene Symbol:KLF13 ( BTEB3,FKLF2,NSLP1,RFLAT-1,RFLAT1 )
Gene Full Name: Kruppel-like factor 13
Band: 15q13.3
Quick LinksEntrez ID:51621; OMIM: 605328; Uniprot ID:KLF13_HUMAN; ENSEMBL ID: ENSG00000169926; HGNC ID: 13672
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
43O-linkedHMM predict
94Phosphothreonine(MAPK)HMM predict
107Phosphoserine(MAPK)HMM predict
107Phosphoserine(CDC2)HMM predict
107O-linkedHMM predict
119PhosphoserineHMM predict
119Phosphoserine(ATM)HMM predict
119O-linkedHMM predict
142O-linkedHMM predict
142O-linkedHMM predict
211Phosphoserine(CK2)HMM predict
268Phosphoserine(IKK)HMM predict
279Phosphoserine(CDC2)HMM predict
279Phosphoserine(IKK)HMM predict
281O-linkedHMM predict
281O-linkedHMM predict
281O-linkedHMM predict
283Phosphoserine(MAPK)HMM predict
283Phosphoserine(CDC2)HMM predict
283Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015995
  • Location:chr15 29406374-29457392
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 29405496 29406812 1316 221
Fos K562GSE19551 29405704 29406448 744 299
KLF4 hESGSE17917 29398031 29398247 216 8236
VDR GM10861-stimGSE22484 29387093 29388356 1263 18650
hScc1 BcellGSE12603 29398231 29398360 129 8079
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 29467160 29467466 306 9921
hScc1 BcellGSE12603 29461448 29461582 134 4123
hScc1 BcellGSE12603 29471447 29473083 1636 14873
hScc1 BcellGSE12603 29476601 29476951 350 19384
p63 keratinocytesGSE17611 29463707 29464676 969 6799
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 29438797 29442134 3337 0
CBP T30-glioblastomaGSE21026 29418192 29419201 1009 0
CTCF CD4GSE12889 29445395 29445680 285 0
CTCF CD4SISSRdata 29445395 29445680 285 0
CTCF G2GSE9613 29407169 29407591 422 0
CTCF G2GSE9613 29410855 29411131 276 0
CTCF G2GSE9613 29426344 29426701 357 0
CTCF G2GSE9613 29428019 29428210 191 0
CTCF G2GSE9613 29451680 29452334 654 0
Myc K562GSE19551 29445101 29445812 711 0
Oct1 H2O2-HelaGSE14283 29408389 29408421 32 0
P300 T0-glioblastomaGSE21026 29432624 29433686 1062 0
P300 T30-glioblastomaGSE21026 29451965 29452420 455 0
PHF8 HeLaGSE20725 29404825 29408091 3266 0
PHF8 Hs68minusFBSGSE20725 29406204 29406908 704 0
TFAP2C MCF7GSE21234 29443855 29444500 645 0
TFAP2C MCF7GSE21234 29446319 29446811 492 0
TFAP2C MCF7GSE21234 29452047 29452449 402 0
VDR GM10855-stimGSE22484 29423671 29435852 12181 0
VDR GM10855-stimGSE22484 29435873 29442963 7090 0
VDR GM10861-stimGSE22484 29431276 29443818 12542 0
hScc1 BcellGSE12603 29404746 29408713 3967 0
hScc1 BcellGSE12603 29417931 29418228 297 0
hScc1 BcellGSE12603 29424310 29426074 1764 0
hScc1 BcellGSE12603 29432307 29432917 610 0
hScc1 BcellGSE12603 29445242 29446243 1001 0
hScc1 BcellGSE12603 29451537 29452002 465 0
p130 shRbQuiescentGSE19898 29418142 29418707 565 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-100 hsa-mir-100 11 19396866
hsa-miR-100* hsa-mir-100 11 19396866
hsa-miR-125a-3p hsa-mir-125a 19 20589685
hsa-miR-125a-5p hsa-mir-125a 19 20589685
hsa-miR-125b hsa-mir-125b-1 11 21118986
hsa-miR-125b hsa-mir-125b-2 21 21118986
hsa-miR-125b hsa-mir-125b-1 11 19396866
hsa-miR-125b hsa-mir-125b-2 21 19396866
hsa-miR-200c hsa-mir-200c 12 19229866
hsa-miR-200c* hsa-mir-200c 12 19229866
hsa-miR-302d hsa-mir-302d 4 19229866
hsa-miR-302d* hsa-mir-302d 4 19229866
hsa-miR-367 hsa-mir-367 4 19229866
hsa-miR-367* hsa-mir-367 4 19229866
hsa-miR-372 hsa-mir-372 19 19229866
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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