Annotation Detail for TPPP3
Basic Information Top
| Gene Symbol: | TPPP3 ( p20,p25gamma ) |
|---|---|
| Gene Full Name: | tubulin polymerization-promoting protein family member 3 |
| Band: | 16q22.1 |
| Quick Links | Entrez ID:51673; OMIM: NA; Uniprot ID:TPPP3_HUMAN; ENSEMBL ID: ENSG00000159713; HGNC ID: 24162 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 49 | Phosphoserine(IKK) | HMM predict |
| 84 | Phosphothreonine(PKC) | HMM predict |
| 160 | Phosphotyrosine(EGFR) | HMM predict |
| 160 | Phosphotyrosine(INSR) | HMM predict |
| 160 | Phosphotyrosine(Jak) | HMM predict |
| 160 | Phosphotyrosine(Syk) | HMM predict |
| 166 | Asparagine | HMM predict |
| 169 | Threonine | HMM predict |
- RefSeq ID: NM_015964
- Location:chr16 65981214-65984921
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 65984793 | 65985104 | 311 | 27 |
| hScc1 | Bcell | GSE12603 | 65984691 | 65985166 | 475 | 7 |
| hScc1 | CdLS | GSE12603 | 65984691 | 65985377 | 686 | 113 |
| p130 | shRbSenescent | GSE19898 | 65985115 | 65985333 | 218 | 303 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 65982709 | 65983436 | 727 | 0 |
| Rb | Senescent | GSE19898 | 65984667 | 65985097 | 430 | 0 |
| p130 | Senescent | GSE19898 | 65984313 | 65985385 | 1072 | 0 |
| p130 | shRbSenescent | GSE19898 | 65984490 | 65985059 | 569 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 15131085 |
| hsa-let-7b* | hsa-let-7b | 22 | 15131085 |
| hsa-let-7e | hsa-let-7e | 19 | 15131085 |
| hsa-let-7e* | hsa-let-7e | 19 | 15131085 |
| hsa-miR-103 | hsa-mir-103-2 | 20 | 15131085 |
| hsa-miR-103 | hsa-mir-103-1 | 5 | 15131085 |
| hsa-miR-141 | hsa-mir-141 | 12 | 15131085 |
| hsa-miR-141* | hsa-mir-141 | 12 | 15131085 |
| hsa-miR-145 | hsa-mir-145 | 5 | 15131085 |
| hsa-miR-145* | hsa-mir-145 | 5 | 15131085 |
| hsa-miR-15a | hsa-mir-15a | 13 | 15131085 |
| hsa-miR-15a* | hsa-mir-15a | 13 | 15131085 |
| hsa-miR-15b | hsa-mir-15b | 3 | 15131085 |
| hsa-miR-15b* | hsa-mir-15b | 3 | 15131085 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 15131085 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 15131085 |
| hsa-miR-199b-3p | hsa-mir-199b | 9 | 15131085 |
| hsa-miR-199b-5p | hsa-mir-199b | 9 | 15131085 |
| hsa-miR-23a | hsa-mir-23a | 19 | 15131085 |
| hsa-miR-23a* | hsa-mir-23a | 19 | 15131085 |
| hsa-miR-24 | hsa-mir-24-1 | 9 | 15131085 |
| hsa-miR-24 | hsa-mir-24-2 | 19 | 15131085 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 488 | mRNA repression | TRUE | miR-16 | CGI-38 | in vitro reporter gene assay (Luciferase) | 15131085 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000159713 | n_a | n_a | n_a | "epithelium, lymphocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, sarcoma" |
Cis-Nats regulation