Annotation Detail for CPSF3
Basic Information Top
| Gene Symbol: | CPSF3 ( CPSF,CPSF-73,CPSF73,YSH1 ) |
|---|---|
| Gene Full Name: | cleavage and polyadenylation specific factor 3, 73kDa |
| Band: | 2p25.1 |
| Quick Links | Entrez ID:51692; OMIM: 606029; Uniprot ID:CPSF3_HUMAN; ENSEMBL ID: ENSG00000119203; HGNC ID: 2326 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 681 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 343 | Phosphoserine(IKK) | HMM predict |
| 399 | Phosphotyrosine(Syk) | HMM predict |
| 399 | Sulfotyrosine | HMM predict |
| 402 | Phosphothreonine(PKC) | HMM predict |
| 502 | N-linked | HMM predict |
| 503 | Phosphotyrosine(INSR) | HMM predict |
| 553 | N-linked | HMM predict |
| 576 | Phosphotyrosine(Jak) | HMM predict |
| 659 | Phosphoserine(CK2) | HMM predict |
- RefSeq ID: NM_016207
- Location:chr2 9481318-9530677
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| p130 | shRbSenescent | GSE19898 | 9480961 | 9481547 | 586 | 65 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 9484941 | 9485228 | 287 | 0 |
| CTCF | G2 | GSE9613 | 9492218 | 9492416 | 198 | 0 |
| CTCF | G2 | GSE9613 | 9525417 | 9525557 | 140 | 0 |
| ER | E2-MCF7 | GSE14664 | 9520610 | 9520642 | 32 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 9495540 | 9495629 | 89 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 9511978 | 9512021 | 43 | 0 |
| GABP | k562 | GSE8489 | 9481223 | 9483199 | 1976 | 0 |
| GABP | k562 | GSE8489 | 9483641 | 9485264 | 1623 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 9482078 | 9483235 | 1157 | 0 |
| H3K4me3 | colorectal | cancer | 9481599 | 9482290 | 691 | 0 |
| H3ac | HepG2 | E | 9481373 | 9483267 | 1894 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 9511289 | 9511315 | 26 | 0 |
| Oct1 | Hela | GSE14283 | 9511289 | 9511332 | 43 | 0 |
| Oct1 | Hela | GSE14283 | 9529622 | 9529664 | 42 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 9512782 | 9512839 | 57 | 0 |
| TAF | k562 | GSE8489 | 9481670 | 9482468 | 798 | 0 |
| p130 | shRbQuiescent | GSE19898 | 9481661 | 9482106 | 445 | 0 |
Validated miRNA targets