AutismKB 2.0

Annotation Detail for PDYN


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:PDYN ( MGC26418,PENKB )
Gene Full Name: prodynorphin
Band: 20p13
Quick LinksEntrez ID:5173; OMIM: 131340; Uniprot ID:PDYN_HUMAN; ENSEMBL ID: ENSG00000101327; HGNC ID: 8820
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
26S-palmitoylHMM predict
64Phosphoserine(IKK)HMM predict
84Phosphoserine(CK1)HMM predict
92Phosphotyrosine(SRC)HMM predict
123Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_024411
  • Location:chr20 1907402-1922701
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1935456 1935790 334 12922
NRSF JurkatGSE13047 1934073 1935816 1743 12243
NRSF mAbJurkat 1924451 1925868 1417 2458
NRSF mAbJurkat 1929851 1930076 225 7262
NRSF mAbJurkat 1930378 1931651 1273 8313
NRSF mAbJurkat 1932120 1933146 1026 9932
NRSF mAbJurkat 1933535 1935067 1532 11600
NRSF mAbJurkat 1935456 1936337 881 13195
NRSF mAbJurkat 1937023 1939102 2079 15361
NRSF-mono JurkatQuESTdata 1934173 1935770 1597 12270
NRSF-poly JurkatQuESTdata 1934073 1935903 1830 12287
hScc1 BcellGSE12603 1924555 1924941 386 2047
hScc1 BcellGSE12603 1926177 1926439 262 3607
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 1894233 1894595 362 12989
CTCF CD4SISSRdata 1894233 1894595 362 12989
CTCF G2GSE9613 1894169 1894667 498 12985
Myc K562GSE19551 1894229 1894735 506 12921
Myc hESGSE17917 1894308 1894731 423 12883
NRSF mAbJurkat 1906365 1906990 625 725
USF1 HepG2E 1893280 1893448 168 14039
USF1 HepG2E 1893919 1895756 1837 12565
hScc1 BcellGSE12603 1893988 1894995 1007 12911
hScc1 CdLSGSE12603 1893919 1894776 857 13055
hScc1 G2GSE9613 1894136 1894667 531 13001
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF JurkatGSE13047 1907837 1908580 743 0
NRSF mAbJurkat 1907380 1910086 2706 0
NRSF-mono JurkatQuESTdata 1907843 1908511 668 0
NRSF-poly JurkatQuESTdata 1907997 1908580 583 0
hScc1 BcellGSE12603 1911094 1911686 592 0
hScc1 BcellGSE12603 1922308 1922929 621 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
15970 mRNA chr20 1875891 1936163 15300 mRNA PDYN chr20 1907402 1922702 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved