Annotation Detail for RAB8B
Basic Information Top
| Gene Symbol: | RAB8B ( FLJ38125 ) |
|---|---|
| Gene Full Name: | RAB8B, member RAS oncogene family |
| Band: | 15q22.2 |
| Quick Links | Entrez ID:51762; OMIM: 613532; Uniprot ID:RAB8B_HUMAN; ENSEMBL ID: ENSG00000166128; HGNC ID: 30273 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 3 | N6-acetyllysine. | |
| 5 | Phosphotyrosine. | |
| 45 | Effector region (By similarity). | |
| 204 | Cysteine methyl ester (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 204 | S-geranylgeranyl cysteine (Bysimilarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 34 | N-linked | HMM predict |
| 36 | O-linked | HMM predict |
| 132 | Phosphoserine(PKG) | HMM predict |
| 178 | N-linked | HMM predict |
| 181 | N-linked | HMM predict |
- RefSeq ID: NM_016530
- Location:chr15 61268780-61347023
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 61268079 | 61269012 | 933 | 235 |
| Oct1 | Hela | GSE14283 | 61266719 | 61266758 | 39 | 2042 |
| PHF8 | 293T | GSE20725 | 61268156 | 61269403 | 1247 | 1 |
| TFAP2C | MCF7 | GSE21234 | 61265248 | 61265854 | 606 | 3230 |
| hScc1 | Bcell | GSE12603 | 61268367 | 61268955 | 588 | 120 |
| p130 | Senescent | GSE19898 | 61268345 | 61268772 | 427 | 222 |
| p130 | shRbQuiescent | GSE19898 | 61267977 | 61268655 | 678 | 465 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| KLF4 | hES | GSE17917 | 61349676 | 61349835 | 159 | 2732 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 61283070 | 61283246 | 176 | 0 |
| CTCF | CD4 | SISSRdata | 61283070 | 61283246 | 176 | 0 |
| FOXA1 | eGFP | GSE10845 | 61291392 | 61291793 | 401 | 0 |
| H3K4me3 | colorectal | cancer | 61269306 | 61269984 | 678 | 0 |
| H3ac | HepG2 | E | 61269306 | 61270165 | 859 | 0 |
| NRSF | mAb | Jurkat | 61269552 | 61270337 | 785 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 61300614 | 61300643 | 29 | 0 |
| Oct4 | hES | GSE17917 | 61335612 | 61335980 | 368 | 0 |
| PAX3-FKHR | Rh4 | GSE19063 | 61317559 | 61318757 | 1198 | 0 |
| RARA | MCF7 | GSE15244 | 61326592 | 61326955 | 363 | 0 |
| hScc1 | Bcell | GSE12603 | 61329981 | 61330123 | 142 | 0 |
| p63 | keratinocytes | GSE17611 | 61302730 | 61303350 | 620 | 0 |
Validated miRNA targets