AutismKB 2.0

Annotation Detail for SERPINB9


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Basic Information Top
Gene Symbol:SERPINB9 ( CAP-3,CAP3,PI9 )
Gene Full Name: serpin peptidase inhibitor, clade B (ovalbumin), member 9
Band: 6p25.2
Quick LinksEntrez ID:5272; OMIM: 601799; Uniprot ID:SPB9_HUMAN; ENSEMBL ID: ENSG00000170542; HGNC ID: 8955
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
241Phosphothreonine(PKC)HMM predict
278Phosphotyrosine(Syk)HMM predict
333O-linkedHMM predict
372ArginineHMM predict
373PhenylalanineHMM predict
374PhenylalanineHMM predict
375PhenylalanineHMM predict
376PhenylalanineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004155
  • Location:chr6 2832504-2848505
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 2856965 2857257 292 8606
CTCF CD4SISSRdata 2856965 2857257 292 8606
CTCF JurkatGSE12889 2856963 2857233 270 8593
CTCF G2GSE9613 2856982 2857282 300 8627
CTCF G2GSE9613 2862702 2863643 941 14667
CTCF G2GSE9613 2865952 2866360 408 17651
Myc K562GSE19551 2856910 2857413 503 8656
Nanog hESGSE18292 2861658 2862149 491 13398
RARA MCF7GSE15244 2853738 2853870 132 5299
Sox2 hESGSE18292 2861526 2862202 676 13359
hScc1 BcellGSE12603 2856872 2857318 446 8590
hScc1 BcellGSE12603 2865891 2866360 469 17620
hScc1 CdLSGSE12603 2856846 2857318 472 8577
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 2821115 2822031 916 10932
P300 T0-glioblastomaGSE21026 2821609 2822946 1337 10227
RARA MCF7GSE15244 2821783 2822067 284 10580
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 2837006 2837193 187 0
CTCF G2GSE9613 2847045 2847531 486 0
CTCF G2GSE9613 2848067 2848813 746 0
H3ac HepG2E 2846436 2847081 645 0
H3ac HepG2E 2847337 2847693 356 0
Pol2 GM12878GSE19551 2847813 2848733 920 0
hScc1 BcellGSE12603 2837084 2837297 213 0
hScc1 BcellGSE12603 2847211 2847569 358 0
hScc1 BcellGSE12603 2848215 2848635 420 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 20978860
hsa-miR-1 hsa-mir-1-1 20 20978860
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
22058 HTC chr6 2829220 2845908 178 mRNA SERPINB9 chr6 2832504 2848506Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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