Annotation Detail for CPSF2
Basic Information Top
| Gene Symbol: | CPSF2 ( CPSF100,KIAA1367 ) |
|---|---|
| Gene Full Name: | cleavage and polyadenylation specific factor 2, 100kDa |
| Band: | 14q32.12 |
| Quick Links | Entrez ID:53981; OMIM: 606028; Uniprot ID:CPSF2_HUMAN; ENSEMBL ID: ENSG00000165934; HGNC ID: 2325 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 395 | Phosphotyrosine. | |
| 412 | Phosphoserine (By similarity). | |
| 419 | Phosphoserine. | |
| 420 | Phosphoserine. | |
| 423 | Phosphoserine. | |
| 660 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 395 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 395 | Phosphotyrosine | Phospho.ELM 6.0 |
| 419 | Phosphoserine. | Swiss-Prot 53.0 |
| 419 | Phosphoserine | Phospho.ELM 6.0 |
| 420 | Phosphoserine. | Swiss-Prot 53.0 |
| 420 | Phosphoserine | Phospho.ELM 6.0 |
| 423 | Phosphoserine | Phospho.ELM 6.0 |
| 423 | Phosphoserine. | Swiss-Prot 53.0 |
| 660 | Phosphoserine. | Swiss-Prot 53.0 |
| 660 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 204 | N-linked | HMM predict |
| 280 | Phosphoserine(CK1) | HMM predict |
| 377 | Phosphothreonine(CK2) | HMM predict |
| 395 | Phosphotyrosine(EGFR) | HMM predict |
| 419 | Phosphoserine(CK1) | HMM predict |
| 419 | Phosphoserine(CK2) | HMM predict |
| 423 | Phosphoserine(CK2) | HMM predict |
| 493 | Phosphothreonine(CK2) | HMM predict |
| 498 | Phosphoserine(CK1) | HMM predict |
| 601 | Phosphoserine(CK1) | HMM predict |
| 613 | Phosphoserine(IKK) | HMM predict |
| 668 | Phosphoserine(CK1) | HMM predict |
| 771 | Isoleucine | HMM predict |
- RefSeq ID: NM_017437
- Location:chr14 91658081-91700295
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| P300 | T30-glioblastoma | GSE21026 | 91657427 | 91658726 | 1299 | 5 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Sox2 | hES | GSE18292 | 91700615 | 91700800 | 185 | 412 |
| p63 | keratinocytes | GSE17611 | 91712388 | 91713016 | 628 | 12407 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 91671475 | 91671677 | 202 | 0 |
| CTCF | CD4 | SISSRdata | 91671475 | 91671677 | 202 | 0 |
| H3K4me3 | colorectal | cancer | 91658464 | 91658857 | 393 | 0 |
| H3ac | HepG2 | E | 91658325 | 91659094 | 769 | 0 |
| H3ac | HepG2 | E | 91659796 | 91660615 | 819 | 0 |
| Rb | Quiescent | GSE19898 | 91657695 | 91658596 | 901 | 0 |
| TAF | Hela | GSE8489 | 91664592 | 91665173 | 581 | 0 |
| TAF | k562 | GSE8489 | 91659796 | 91660711 | 915 | 0 |
| hScc1 | CdLS | GSE12603 | 91671339 | 91671756 | 417 | 0 |
| p130 | Quiescent | GSE19898 | 91658123 | 91658749 | 626 | 0 |
| p130 | Senescent | GSE19898 | 91658107 | 91658694 | 587 | 0 |
| p130 | shRbQuiescent | GSE19898 | 91657820 | 91658595 | 775 | 0 |
| p130 | shRbSenescent | GSE19898 | 91657954 | 91658781 | 827 | 0 |
Validated miRNA targets