AutismKB 2.0

Annotation Detail for SNTG1


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Basic Information Top
Gene Symbol:SNTG1 ( G1SYN,SYN4 )
Gene Full Name: syntrophin, gamma 1
Band: 8q11.21
Quick LinksEntrez ID:54212; OMIM: 608714; Uniprot ID:SNTG1_HUMAN; ENSEMBL ID: ENSG00000147481; HGNC ID: 13740
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
59Phosphothreonine(PKC)HMM predict
163Phosphoserine(IKK)HMM predict
163O-linkedHMM predict
163Phosphoserine(CK1)HMM predict
181N-linkedHMM predict
182N-linkedHMM predict
190Phosphoserine(IKK)HMM predict
194Phosphoserine(CDC2)HMM predict
217Phosphoserine(ATM)HMM predict
265N-linkedHMM predict
270N-linkedHMM predict
336Phosphoserine(CK1)HMM predict
502O-linkedHMM predict
506O-linkedHMM predict
507O-linkedHMM predict
509O-linkedHMM predict
510Phosphothreonine(PKC)HMM predict
510O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018967
  • Location:chr8 50987149-51867979
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 50984947 50985227 280 2063
ER E2-MCF7GSE14664 50983070 50983110 40 4060
NRSF JurkatGSE13047 50986383 50987299 916 309
NRSF JurkatSISSRdata 50986518 50987101 583 340
NRSF mAbJurkat 50985479 50987802 2323 509
NRSF-mono JurkatQuESTdata 50986473 50987292 819 267
NRSF pAbJurkat 50985504 50986354 850 1221
NRSF-poly JurkatQuESTdata 50986383 50987121 738 398
Oct1 HelaGSE14283 50983074 50983108 34 4059
hScc1 BcellGSE12603 50984811 50985152 341 2168
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 51876435 51876478 43 8477
Oct1 HelaGSE14283 51876436 51876479 43 8478
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 51537507 51537951 444 0
CBP T30-glioblastomaGSE21026 51214457 51215253 796 0
CTCF HelaGSE12889 50988931 50989162 231 0
CTCF G2GSE9613 51109952 51110157 205 0
CTCF G2GSE9613 51130066 51130404 338 0
CTCF G2GSE9613 51324446 51324698 252 0
ER E2-MCF7GSE14664 50987186 50987221 35 0
ER E2-MCF7GSE14664 51784106 51784195 89 0
ER E2-MCF7GSE14664 51855945 51855980 35 0
ER Fulvestrant-MCF7GSE14664 51855947 51855986 39 0
FOXA1 MCF7GSE15244 51095074 51095425 351 0
FOXA1 MCF7GSE15244 51190713 51191076 363 0
NRSF JurkatGSE13047 51638292 51638865 573 0
NRSF JurkatSISSRdata 51638459 51638762 303 0
NRSF mAbJurkat 51637795 51638867 1072 0
NRSF-mono JurkatQuESTdata 51638377 51638834 457 0
NRSF pAbJurkat 51638006 51638291 285 0
NRSF-poly JurkatQuESTdata 51638445 51638771 326 0
Nanog hESGSE18292 51109177 51109765 588 0
Oct1 H2O2-HelaGSE14283 50993990 50994028 38 0
Oct1 H2O2-HelaGSE14283 51248304 51248336 32 0
Oct1 H2O2-HelaGSE14283 51324271 51324301 30 0
Oct1 HelaGSE14283 50993990 50994028 38 0
Oct1 HelaGSE14283 51133768 51133800 32 0
Oct1 HelaGSE14283 51413657 51413771 114 0
Oct1 HelaGSE14283 51489134 51489168 34 0
Oct1 HelaGSE14283 51648199 51648273 74 0
Oct1 HelaGSE14283 51740288 51740318 30 0
Oct1 HelaGSE14283 51855943 51855976 33 0
Oct4 hESGSE17917 51473341 51473545 204 0
Oct4 hESGSE17917 51622764 51623156 392 0
P300 T30-glioblastomaGSE21026 51214468 51215469 1001 0
P300 T30-glioblastomaGSE21026 51258440 51259071 631 0
PAX3-FKHR Rh4GSE19063 51486556 51487401 845 0
RARA MCF7GSE15244 51052519 51053251 732 0
RARA MCF7GSE15244 51075739 51076066 327 0
RARA MCF7GSE15244 51185499 51185710 211 0
RARA MCF7GSE15244 51190150 51190370 220 0
RARA MCF7GSE15244 51190713 51191076 363 0
RARG MCF7GSE15244 51075739 51076066 327 0
RARG MCF7GSE15244 51190713 51191076 363 0
Stat6 IL-4-hr1GSE17850 51483500 51484020 520 0
Stat6 IL-4-hr4GSE17850 51102084 51102665 581 0
TFAP2C MCF7GSE21234 51055292 51055735 443 0
TFAP2C MCF7GSE21234 51273127 51273670 543 0
TFAP2C MCF7GSE21234 51738181 51738533 352 0
VDR GM10861-stimGSE22484 51756911 51758177 1266 0
hScc1 BcellGSE12603 51473199 51473619 420 0
hScc1 CdLSGSE12603 51473199 51473731 532 0
hScc1 G2GSE9613 51130066 51130437 371 0
p130 SenescentGSE19898 51257985 51258281 296 0
p130 shRbSenescentGSE19898 51131147 51131645 498 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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