AutismKB 2.0

Annotation Detail for SNTG2


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Basic Information Top
Gene Symbol:SNTG2 ( G2SYN,MGC133174,SYN5 )
Gene Full Name: syntrophin, gamma 2
Band: 2p25.3
Quick LinksEntrez ID:54221; OMIM: 608715; Uniprot ID:SNTG2_HUMAN; ENSEMBL ID: ENSG00000172554; HGNC ID: 13741
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
13MethylarginineHMM predict
28Phosphothreonine(PKA)HMM predict
75Phosphothreonine(PKC)HMM predict
131N-linkedHMM predict
168Phosphoserine(CDC2)HMM predict
173O-linkedHMM predict
176Phosphoserine(IKK)HMM predict
176O-linkedHMM predict
176Phosphoserine(CK1)HMM predict
177Phosphoserine(IKK)HMM predict
181Phosphoserine(CDC2)HMM predict
193N-linkedHMM predict
195O-linkedHMM predict
196O-linkedHMM predict
197O-linkedHMM predict
200O-linkedHMM predict
201Phosphoserine(ATM)HMM predict
201Phosphoserine(IKK)HMM predict
204PhosphoserineHMM predict
204Phosphoserine(CDC2)HMM predict
204Phosphoserine(CDK)HMM predict
315Phosphothreonine(PKC)HMM predict
332O-linkedHMM predict
333PhosphothreonineHMM predict
431Phosphothreonine(PKC)HMM predict
528Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018968
  • Location:chr2 936554-1350388
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 917295 918238 943 18788
CTCF G2GSE9613 923981 924271 290 12429
H3K27me3 colorectalcancer 935121 935538 417 1225
hScc1 G2GSE9613 917428 918238 810 18722
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 1147845 1150892 3047 0
CTCF CD4GSE12889 1126122 1126516 394 0
CTCF CD4SISSRdata 1126122 1126516 394 0
CTCF HelaGSE12889 1126084 1126387 303 0
CTCF G2GSE9613 1000385 1000868 483 0
CTCF G2GSE9613 1041678 1041924 246 0
CTCF G2GSE9613 1049067 1049283 216 0
CTCF G2GSE9613 1064068 1064479 411 0
CTCF G2GSE9613 1102323 1102754 431 0
CTCF G2GSE9613 1124129 1124396 267 0
CTCF G2GSE9613 1126144 1126424 280 0
CTCF G2GSE9613 1141451 1141815 364 0
CTCF G2GSE9613 1142244 1142569 325 0
CTCF G2GSE9613 1152854 1153223 369 0
CTCF G2GSE9613 1153547 1153968 421 0
CTCF G2GSE9613 1208457 1209804 1347 0
CTCF G2GSE9613 1255299 1255702 403 0
CTCF G2GSE9613 1289161 1289757 596 0
CTCF G2GSE9613 1300154 1300382 228 0
CTCF G2GSE9613 1306134 1306944 810 0
CTCF G2GSE9613 1322645 1322912 267 0
CTCF G2GSE9613 1325863 1329157 3294 0
CTCF G2GSE9613 1329906 1330161 255 0
CTCF G2GSE9613 1337046 1337548 502 0
CTCF G2GSE9613 936337 937094 757 0
CTCF G2GSE9613 941973 942227 254 0
CTCF G2GSE9613 943190 943450 260 0
CTCF G2GSE9613 959989 960179 190 0
CTCF G2GSE9613 960651 961015 364 0
CTCF G2GSE9613 968603 968991 388 0
CTCF G2GSE9613 972808 972954 146 0
CTCF G2GSE9613 973428 973827 399 0
CTCF G2GSE9613 983067 983330 263 0
CTCF G2GSE9613 994852 995087 235 0
CTCF G2GSE9613 998584 999067 483 0
ETS1 JurkatGSE17954 1148127 1150131 2004 0
FOXA1 MCF7GSE15244 1091657 1094835 3178 0
FOXA1 MCF7GSE15244 1208563 1209667 1104 0
FoxA1 MCF7MACSdata 1218042 1218286 244 0
GABP GMOGSE8489 1289506 1289757 251 0
GABP k562GSE8489 1152854 1153885 1031 0
GABP k562GSE8489 1208303 1209701 1398 0
HIF1 HypoHepG2 1152854 1153968 1114 0
HIF1 HypoHepG2 1325138 1329043 3905 0
Nanog hESGSE18292 1121673 1122038 365 0
Nanog hESGSE18292 1173733 1173927 194 0
Nanog hESGSE18292 1324299 1324521 222 0
P300 T30-glioblastomaGSE21026 1040786 1041381 595 0
RARA MCF7GSE15244 1344269 1345828 1559 0
SRF GMOGSE8489 1289433 1289757 324 0
SRF HepG2GSE8489 1289433 1289757 324 0
SRF k562GSE8489 1208303 1209772 1469 0
SRF k562GSE8489 1337548 1337884 336 0
TAF HelaGSE8489 1208303 1209603 1300 0
TAF k562GSE8489 1152854 1153932 1078 0
TAF k562GSE8489 1208303 1209737 1434 0
TAF k562GSE8489 993750 994039 289 0
TFAP2C MCF7GSE21234 1076365 1076720 355 0
TFAP2C MCF7GSE21234 1077559 1077888 329 0
TFAP2C MCF7GSE21234 1230137 1230630 493 0
TFAP2C MCF7GSE21234 1335874 1336433 559 0
TFAP2C MCF7GSE21234 983121 983897 776 0
USF1 HepG2E 1091538 1094723 3185 0
hScc1 BcellGSE12603 1152854 1153968 1114 0
hScc1 BcellGSE12603 1208563 1209737 1174 0
hScc1 BcellGSE12603 1265855 1266671 816 0
hScc1 BcellGSE12603 1325473 1326347 874 0
hScc1 BcellGSE12603 936204 936987 783 0
hScc1 G2GSE9613 1152854 1153968 1114 0
hScc1 G2GSE9613 1208423 1209772 1349 0
hScc1 G2GSE9613 940012 940489 477 0
hScc1 G2GSE9613 998326 999247 921 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
13823 HTC SNTG2 chr2 936553 1147355 3850 mRNA chr2 1023076 1026926 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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