Annotation Detail for POLR2B
Basic Information Top
| Gene Symbol: | POLR2B ( POL2RB,RPB2,hRPB140,hsRPB2 ) |
|---|---|
| Gene Full Name: | polymerase (RNA) II (DNA directed) polypeptide B, 140kDa |
| Band: | 4q12 |
| Quick Links | Entrez ID:5431; OMIM: 180661; Uniprot ID:RPB2_HUMAN; ENSEMBL ID: ENSG00000047315; HGNC ID: 9188 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 10 | Phosphotyrosine(Syk) | HMM predict |
| 92 | Phosphotyrosine(EGFR) | HMM predict |
| 117 | N-linked | HMM predict |
| 188 | N-linked | HMM predict |
| 206 | Phosphotyrosine(SRC) | HMM predict |
| 223 | Phosphoserine(IKK) | HMM predict |
| 227 | N-linked | HMM predict |
| 229 | O-linked | HMM predict |
| 232 | O-linked | HMM predict |
| 250 | Phosphoserine(PKG) | HMM predict |
| 290 | Sulfotyrosine | HMM predict |
| 367 | Phosphotyrosine(INSR) | HMM predict |
| 388 | Sulfotyrosine | HMM predict |
| 487 | Phosphoserine(CDC2) | HMM predict |
| 514 | Phosphothreonine(CDC2) | HMM predict |
| 536 | Phosphoserine(ATM) | HMM predict |
| 650 | N-linked | HMM predict |
| 717 | N-linked | HMM predict |
| 722 | N-linked | HMM predict |
| 724 | Phosphotyrosine(Syk) | HMM predict |
| 746 | Phosphothreonine(PKA) | HMM predict |
| 760 | Phosphothreonine(PKC) | HMM predict |
| 797 | N-linked | HMM predict |
| 942 | O-linked | HMM predict |
| 977 | Phosphothreonine(PKC) | HMM predict |
| 990 | Phosphoserine(PKG) | HMM predict |
| 1142 | N-linked | HMM predict |
| 1144 | Phosphothreonine(PKA) | HMM predict |
| 1163 | Methionine | HMM predict |
- RefSeq ID: NM_000938
- Location:chr4 57539865-57592090
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 57539314 | 57540284 | 970 | 67 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K4me3 | colorectal | cancer | 57539453 | 57540525 | 1072 | 0 |
| H3ac | HepG2 | E | 57539453 | 57540525 | 1072 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 57584060 | 57584483 | 423 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 57539348 | 57540510 | 1162 | 0 |
| Stat6 | IL-4-hr4 | GSE17850 | 57539491 | 57540453 | 962 | 0 |
| TAF | Hela | GSE8489 | 57539453 | 57540452 | 999 | 0 |
| TAF | k562 | GSE8489 | 57539453 | 57540416 | 963 | 0 |
| p130 | Senescent | GSE19898 | 57539624 | 57540167 | 543 | 0 |
| p130 | shRbQuiescent | GSE19898 | 57539539 | 57540333 | 794 | 0 |
| p130 | shRbSenescent | GSE19898 | 57539831 | 57540175 | 344 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19720 | mRNA | POLR2B | chr4 | 57686036 | 57738262 | 89 | mRNA | IGFBP7 | chr4 | 57738173 | 57817467 | Sense/Antisense (SA) pairs |