AutismKB 2.0

Annotation Detail for SSH1


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Basic Information Top
Gene Symbol:SSH1 ( FLJ21928,FLJ38102,KIAA1298,SSH1L )
Gene Full Name: slingshot homolog 1 (Drosophila)
Band: 12q24.11
Quick LinksEntrez ID:54434; OMIM: 606778; Uniprot ID:SSH1_HUMAN; ENSEMBL ID: ENSG00000084112; HGNC ID: 30579
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
978Phosphoserine.
1042Phosphoserine.
Location(AA) Modifications Resource
937PhosphoserinePhospho.ELM 6.0
978Phosphoserine.Swiss-Prot 53.0
978PhosphoserinePhospho.ELM 6.0
1042Phosphoserine.Swiss-Prot 53.0
1042PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
11Phosphothreonine(MAPK)HMM predict
13O-linkedHMM predict
13O-linkedHMM predict
16Phosphoserine(CK2)HMM predict
20Phosphoserine(IKK)HMM predict
37Phosphoserine(CK1)HMM predict
57Phosphoserine(CDC2)HMM predict
215PhosphoserineHMM predict
215Phosphoserine(CK1)HMM predict
270N-linkedHMM predict
323N-linkedHMM predict
326N-linkedHMM predict
337Phosphotyrosine(INSR)HMM predict
340N-linkedHMM predict
385N-linkedHMM predict
402O-linkedHMM predict
464Phosphoserine(CK1)HMM predict
487Phosphothreonine(MAPK)HMM predict
487Phosphothreonine(CDK)HMM predict
490Phosphoserine(ATM)HMM predict
521Phosphoserine(CDC2)HMM predict
576Phosphoserine(CDC2)HMM predict
583Phosphoserine(IKK)HMM predict
620N-linkedHMM predict
621N-linkedHMM predict
658O-linkedHMM predict
795N-linkedHMM predict
826Phosphothreonine(PKA)HMM predict
834Phosphoserine(IKK)HMM predict
844MethylarginineHMM predict
859Phosphoserine(ATM)HMM predict
875Phosphoserine(ATM)HMM predict
883Phosphoserine(IKK)HMM predict
894O-linkedHMM predict
925O-linkedHMM predict
927Phosphoserine(IKK)HMM predict
929Phosphoserine(CK1)HMM predict
929Phosphoserine(IKK)HMM predict
931N-linkedHMM predict
936Phosphoserine(PKA)HMM predict
937Phosphoserine(PKA)HMM predict
938Phosphoserine(ATM)HMM predict
938Phosphoserine(CK1)HMM predict
940Phosphoserine(CK1)HMM predict
940Phosphoserine(IKK)HMM predict
971Phosphoserine(CDC2)HMM predict
993Phosphoserine(CK2)HMM predict
1004Phosphoserine(ATM)HMM predict
1004Phosphoserine(IKK)HMM predict
1008O-linkedHMM predict
1028Phosphothreonine(PKC)HMM predict
1037ProlineHMM predict
1044PhosphoserineHMM predict
1044Phosphoserine(PKC)HMM predict
1044Phosphoserine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018984
  • Location:chr12 107705098-107775479
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 107776406 107776684 278 1066
CTCF G2GSE9613 107783034 107783282 248 7679
H3K4me3 colorectalcancer 107776214 107776503 289 879
NRSF pAbJurkat 107775328 107775861 533 115
PHF8 293TGSE20725 107774996 107776085 1089 61
Rb GrowingGSE19898 107782466 107782606 140 7057
Rb SenescentGSE19898 107775510 107775710 200 131
hScc1 CdLSGSE12603 107779939 107780451 512 4716
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 107686599 107686964 365 18317
CTCF G2GSE9613 107688198 107688563 365 16718
FOXA1 DLD1GSE12801 107698085 107698636 551 6738
P300 T30-glioblastomaGSE21026 107691559 107692278 719 13180
hScc1 BcellGSE12603 107686523 107687035 512 18320
hScc1 G2GSE9613 107686127 107686860 733 18605
p130 shRbSenescentGSE19898 107691934 107692234 300 13015
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 107755858 107757993 2135 0
CTCF CD4GSE12889 107721481 107721854 373 0
CTCF CD4SISSRdata 107721481 107721854 373 0
CTCF G2GSE9613 107705317 107705681 364 0
CTCF G2GSE9613 107706633 107707021 388 0
CTCF G2GSE9613 107711674 107712110 436 0
CTCF G2GSE9613 107721231 107721597 366 0
CTCF G2GSE9613 107722294 107722862 568 0
CTCF G2GSE9613 107727799 107728015 216 0
CTCF G2GSE9613 107730274 107730540 266 0
CTCF G2GSE9613 107732228 107732678 450 0
CTCF G2GSE9613 107734734 107735161 427 0
CTCF G2GSE9613 107749249 107749566 317 0
CTCF G2GSE9613 107757096 107757236 140 0
CTCF G2GSE9613 107757710 107758112 402 0
CTCF G2GSE9613 107760069 107760407 338 0
CTCF G2GSE9613 107763680 107764407 727 0
CTCF G2GSE9613 107765715 107766393 678 0
CTCF G2GSE9613 107773930 107775861 1931 0
GATA3 MCF7GSE15244 107730202 107730724 522 0
Gata2 K562GSE18868 107773328 107775233 1905 0
H3K4me2 HCT116GSE10453 107773418 107773820 402 0
H3ac HepG2E 107773418 107773996 578 0
H3ac HepG2E 107774393 107775184 791 0
NFkBII GM12878GSE19485 107768437 107770047 1610 0
NFkBII GM12892GSE19485 107768497 107769310 813 0
P300 T30-glioblastomaGSE21026 107755161 107758181 3020 0
RARG MCF7GSE15244 107770440 107770944 504 0
RARG MCF7GSE15244 107773930 107774967 1037 0
Rb shRbQuiescentGSE19898 107706966 107707253 287 0
Stat6 IL-4-hr1GSE17850 107719979 107720489 510 0
TAF HelaGSE8489 107771975 107772781 806 0
TAF HelaGSE8489 107774033 107775184 1151 0
hScc1 BcellGSE12603 107721231 107721744 513 0
hScc1 BcellGSE12603 107731036 107731246 210 0
hScc1 BcellGSE12603 107768762 107769116 354 0
hScc1 BcellGSE12603 107773418 107775693 2275 0
hScc1 CdLSGSE12603 107721231 107721780 549 0
hScc1 CdLSGSE12603 107768762 107769188 426 0
hScc1 CdLSGSE12603 107771975 107772709 734 0
hScc1 G2GSE9613 107711719 107712110 391 0
hScc1 G2GSE9613 107721231 107721705 474 0
hScc1 G2GSE9613 107773785 107775861 2076 0
p130 SenescentGSE19898 107744116 107744898 782 0
p130 SenescentGSE19898 107756182 107756770 588 0
p130 shRbQuiescentGSE19898 107756020 107756594 574 0
p63 keratinocytesGSE17611 107732424 107733535 1111 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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