AutismKB 2.0

Annotation Detail for SEMA5B


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:SEMA5B ( FLJ10372,KIAA1445,SEMAG,SemG )
Gene Full Name: sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
Band: 3q21.1
Quick LinksEntrez ID:54437; OMIM: 609298; Uniprot ID:SEM5B_HUMAN; ENSEMBL ID: ENSG00000082684; HGNC ID: 10737
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
153N-linked (GlcNAc...) (Potential).
236N-linked (GlcNAc...) (Potential).
345N-linked (GlcNAc...) (Potential).
436N-linked (GlcNAc...) (Potential).
788O-linked (GalNAc...) (Potential).
Location(AA) Modifications Resource
59N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
95N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
157N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
178N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
287N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
333N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
378N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
532N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
539N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
547N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
602N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
728N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
944N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
26Phosphoserine(ATM)HMM predict
31Phosphoserine(CK1)HMM predict
34Phosphoserine(CK1)HMM predict
59N-linkedHMM predict
120Phosphothreonine(CK2)HMM predict
157N-linkedHMM predict
178N-linkedHMM predict
185Phosphoserine(ATM)HMM predict
190Phosphotyrosine(Abl)HMM predict
287N-linkedHMM predict
378N-linkedHMM predict
401Phosphothreonine(MAPK)HMM predict
539N-linkedHMM predict
547N-linkedHMM predict
549Phosphothreonine(PKA)HMM predict
557C-linkedHMM predict
560C-linkedHMM predict
583Phosphoserine(CDC2)HMM predict
609C-linkedHMM predict
612C-linkedHMM predict
615C-linkedHMM predict
634Phosphoserine(ATM)HMM predict
667C-linkedHMM predict
670C-linkedHMM predict
673C-linkedHMM predict
678Phosphoserine(IKK)HMM predict
719Phosphothreonine(PKA)HMM predict
728N-linkedHMM predict
761Phosphothreonine(CDK)HMM predict
761Phosphothreonine(PKC)HMM predict
790Phosphoserine(CDC2)HMM predict
790PhosphoserineHMM predict
798C-linkedHMM predict
801C-linkedHMM predict
804C-linkedHMM predict
821Phosphothreonine(PKA)HMM predict
855C-linkedHMM predict
858C-linkedHMM predict
861C-linkedHMM predict
865O-linkedHMM predict
876Phosphothreonine(PKC)HMM predict
878Phosphoserine(PKB)HMM predict
878Phosphoserine(IKK)HMM predict
881Phosphoserine(IKK)HMM predict
881O-linkedHMM predict
881Phosphoserine(CDC2)HMM predict
881Phosphoserine(MAPK)HMM predict
885O-linkedHMM predict
885Phosphoserine(CDC2)HMM predict
885Phosphoserine(ATM)HMM predict
913C-linkedHMM predict
916C-linkedHMM predict
944N-linkedHMM predict
946Phosphoserine(ATM)HMM predict
1018Phosphothreonine(MAPK)HMM predict
1018Phosphothreonine(CDK)HMM predict
1029Phosphothreonine(CDC2)HMM predict
1029Phosphothreonine(MAPK)HMM predict
1035Phosphotyrosine(SRC)HMM predict
1035Phosphotyrosine(INSR)HMM predict
1066O-linkedHMM predict
1068O-linkedHMM predict
1070SulfotyrosineHMM predict
1072Phosphoserine(CDC2)HMM predict
1078Phosphoserine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001031702
  • Location:chr3 124110732-124229265
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 124230046 124230767 721 1141
CTCF G2GSE9613 124232059 124232398 339 2963
CTCF G2GSE9613 124241409 124241561 152 12220
ER MCF7GSE19013 124234592 124235630 1038 5846
FOXA1 MCF7GSE15244 124240101 124241102 1001 11336
H3K27me3 colorectalcancer 124230046 124232131 2085 1823
RARA MCF7GSE15244 124240616 124241102 486 11594
RARG MCF7GSE15244 124235825 124236584 759 6939
RARG MCF7GSE15244 124238492 124239607 1115 9784
RARG MCF7GSE15244 124240241 124241143 902 11427
hScc1 CdLSGSE12603 124228640 124230694 2054 402
hScc1 G2GSE9613 124229847 124230767 920 1042
p130 QuiescentGSE19898 124229995 124230256 261 860
p130 shRbSenescentGSE19898 124229860 124230302 442 816
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 124103373 124103411 38 7341
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 124111236 124111586 350 0
CTCF G2GSE9613 124112597 124112921 324 0
CTCF G2GSE9613 124113757 124114163 406 0
CTCF G2GSE9613 124114875 124115059 184 0
CTCF G2GSE9613 124116751 124117678 927 0
CTCF G2GSE9613 124122611 124123986 1375 0
CTCF G2GSE9613 124127720 124128368 648 0
CTCF G2GSE9613 124130158 124130447 289 0
CTCF G2GSE9613 124131661 124131913 252 0
CTCF G2GSE9613 124139370 124139554 184 0
CTCF G2GSE9613 124143508 124144009 501 0
CTCF G2GSE9613 124144439 124144936 497 0
CTCF G2GSE9613 124145414 124145767 353 0
CTCF G2GSE9613 124146323 124146594 271 0
CTCF G2GSE9613 124147872 124148067 195 0
CTCF G2GSE9613 124149980 124150282 302 0
CTCF G2GSE9613 124158319 124158892 573 0
CTCF G2GSE9613 124162626 124162917 291 0
CTCF G2GSE9613 124163763 124163945 182 0
CTCF G2GSE9613 124170869 124171130 261 0
CTCF G2GSE9613 124172544 124172751 207 0
CTCF G2GSE9613 124173262 124173420 158 0
CTCF G2GSE9613 124175275 124175795 520 0
CTCF G2GSE9613 124179529 124179822 293 0
CTCF G2GSE9613 124180076 124180629 553 0
CTCF G2GSE9613 124183073 124183441 368 0
CTCF G2GSE9613 124193740 124194896 1156 0
CTCF G2GSE9613 124201775 124201985 210 0
CTCF G2GSE9613 124211480 124211728 248 0
CTCF G2GSE9613 124222355 124222488 133 0
CTCF G2GSE9613 124227351 124229583 2232 0
FOXA1 MCF7GSE15244 124160919 124161392 473 0
FOXA1 MCF7GSE15244 124177201 124177690 489 0
FOXA1 MCF7GSE15244 124179458 124180110 652 0
Fos K562GSE19551 124176263 124176560 297 0
H3K27me3 colorectalcancer 124226593 124227847 1254 0
KLF4 hESGSE17917 124116984 124117227 243 0
KLF4 hESGSE17917 124158570 124158734 164 0
Myc K562GSE19551 124140608 124141041 433 0
NRSF JurkatGSE13047 124117784 124118639 855 0
NRSF JurkatGSE13047 124120287 124121149 862 0
NRSF mAbJurkat 124118169 124119011 842 0
NRSF mAbJurkat 124119301 124122997 3696 0
NRSF-mono JurkatQuESTdata 124117930 124118505 575 0
NRSF-mono JurkatQuESTdata 124120286 124121097 811 0
NRSF-poly JurkatQuESTdata 124117940 124118563 623 0
NRSF-poly JurkatQuESTdata 124120467 124121010 543 0
Nanog hESGSE18292 124176281 124176500 219 0
Oct1 H2O2-HelaGSE14283 124207932 124207960 28 0
Oct1 HelaGSE14283 124164365 124164399 34 0
RARA MCF7GSE15244 124177201 124177485 284 0
RARA MCF7GSE15244 124179458 124180229 771 0
RARA MCF7GSE15244 124223575 124224690 1115 0
RARG MCF7GSE15244 124177201 124177690 489 0
RARG MCF7GSE15244 124179458 124180266 808 0
RARG MCF7GSE15244 124189921 124191415 1494 0
TFAP2C MCF7GSE21234 124153815 124154471 656 0
TFAP2C MCF7GSE21234 124179240 124180009 769 0
hScc1 BcellGSE12603 124117422 124117783 361 0
hScc1 BcellGSE12603 124123406 124123776 370 0
hScc1 BcellGSE12603 124129714 124130555 841 0
hScc1 BcellGSE12603 124144439 124144833 394 0
hScc1 BcellGSE12603 124184031 124184204 173 0
hScc1 BcellGSE12603 124213803 124214897 1094 0
hScc1 BcellGSE12603 124227595 124230469 2874 0
hScc1 CdLSGSE12603 124144439 124144936 497 0
hScc1 G2GSE9613 124123406 124123776 370 0
hScc1 G2GSE9613 124144439 124144903 464 0
hScc1 G2GSE9613 124149980 124150318 338 0
hScc1 G2GSE9613 124183147 124183405 258 0
hScc1 G2GSE9613 124227674 124229553 1879 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved