Annotation Detail for DDIT4

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Basic Information Top

Gene Symbol:	DDIT4 ( Dig2,FLJ20500,REDD-1,REDD1,RP11-442H21.1,RTP801 )
Gene Full Name:	DNA-damage-inducible transcript 4
Band:	10q22.1
Quick Links	Entrez ID:54541; OMIM: 607729; Uniprot ID:DDIT4_HUMAN; ENSEMBL ID: ENSG00000168209; HGNC ID: 24944
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	T30-glioblastoma	GSE21026	73702041	73704302	2261	511
H3ac	HepG2	E	73684455	73685438	983	18736
H3ac	HepG2	E	73686769	73687302	533	16647
H3ac	HepG2	E	73691115	73691493	378	12379
H3ac	HepG2	E	73702104	73702539	435	1361
HIF1	Hypo	HepG2	73690344	73691493	1149	12764
HIF1	Hypo	HepG2	73703264	73703992	728	55
NFkBII	GM12878	GSE19485	73688791	73691931	3140	13322
NFkBII	GM12892	GSE19485	73686577	73687665	1088	16562
Nanog	hES	GSE18292	73697144	73697491	347	6365
Oct1	Hela	GSE14283	73687232	73687273	41	16430
RARA	MCF7	GSE15244	73689677	73690378	701	13655
RARA	MCF7	GSE15244	73702177	73702924	747	1132
RARG	MCF7	GSE15244	73689677	73690378	701	13655
RARG	MCF7	GSE15244	73701888	73702895	1007	1291
Rb	Growing	GSE19898	73690518	73690754	236	13047
Rb	Senescent	GSE19898	73689617	73689896	279	13926
Rb	Senescent	GSE19898	73690239	73690694	455	13216
TAF	k562	GSE8489	73701888	73702279	391	1599
TFAP2C	MCF7	GSE21234	73690087	73690826	739	13226
TFAP2C	MCF7	GSE21234	73701765	73703187	1422	1207
TFAP2C	MCF7	GSE21234	73703219	73703502	283	322
hScc1	Bcell	GSE12603	73690633	73691493	860	12620
hScc1	CdLS	GSE12603	73691115	73691493	378	12379
p130	Quiescent	GSE19898	73684701	73684938	237	18863
p130	shRbQuiescent	GSE19898	73702205	73703295	1090	933
p130	shRbSenescent	GSE19898	73690451	73690966	515	12974

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Gata2	K562	GSE18868	73720522	73721376	854	15147
USF1	HepG2	E	73725019	73725584	565	19499

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
H3ac	HepG2	E	73704795	73705809	1014
Pol2	GM12878	GSE19551	73702230	73707392	5162
TAF	k562	GSE8489	73704509	73705698	1189
USF2	HepG2	E	73704995	73705734	739
VDR	GM10861-stim	GSE22484	73702085	73707827	5742
hScc1	Bcell	GSE12603	73703562	73704239	677
hScc1	Bcell	GSE12603	73704581	73704859	278
hScc1	CdLS	GSE12603	73703355	73704968	1613
p130	Senescent	GSE19898	73703437	73704036	599
p130	shRbQuiescent	GSE19898	73703478	73703925	447

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7c	hsa-let-7c	21	20018759
hsa-let-7c*	hsa-let-7c	21	20018759
hsa-miR-21	hsa-mir-21	17	20018759
hsa-miR-21*	hsa-mir-21	17	20018759
hsa-miR-211	hsa-mir-211	15	20018759
hsa-miR-221	hsa-mir-221	X	20018759
hsa-miR-221*	hsa-mir-221	X	20018759
hsa-miR-222	hsa-mir-222	X	20018759
hsa-miR-222*	hsa-mir-222	X	20018759
hsa-miR-34a	hsa-mir-34a	1	20018759
hsa-miR-34a*	hsa-mir-34a	1	20018759
hsa-miR-495	hsa-mir-495	14	21258409
hsa-miR-519a	hsa-mir-519a-1	19	20018759
hsa-miR-519a	hsa-mir-519a-2	19	20018759
hsa-miR-93	hsa-mir-93	7	20018759
hsa-miR-93*	hsa-mir-93	7	20018759
hsa-miR-96	hsa-mir-96	7	20018759
hsa-miR-96*	hsa-mir-96	7	20018759

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018