Annotation Detail for MTMR12

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Basic Information Top

Gene Symbol:	MTMR12 ( 3-PAP,PIP3AP )
Gene Full Name:	myotubularin related protein 12
Band:	5p13.3
Quick Links	Entrez ID:54545; OMIM: 606501; Uniprot ID:MTMRC_HUMAN; ENSEMBL ID: ENSG00000150712; HGNC ID: 18191
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
572	Phosphoserine.
573	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	32365330	32365621	291	16605
CTCF	CD4	SISSRdata	32365330	32365621	291	16605
CTCF	G2	GSE9613	32365153	32365829	676	16621
CTCF	G2	GSE9613	32366160	32366725	565	17572
ER	MCF7	GSE19013	32365487	32366397	910	17072
Fos	K562	GSE19551	32348706	32349404	698	185
H3ac	HepG2	E	32350264	32350655	391	1589
Oct1	Hela	GSE14283	32352080	32352118	38	3229
Oct1	Hela	GSE14283	32360447	32360481	34	11594
Oct4	hES	GSE17917	32365253	32365557	304	16535
P300	T0-glioblastoma	GSE21026	32348342	32349604	1262	103
Rb	Growing	GSE19898	32348911	32349051	140	111
Rb	Senescent	GSE19898	32348884	32349173	289	158
TAF	Hela	GSE8489	32349058	32349284	226	301
TAF	Hela	GSE8489	32350345	32350791	446	1698
TAF	k562	GSE8489	32348889	32349284	395	216
TFAP2C	MCF7	GSE21234	32365215	32365564	349	16519
hScc1	Bcell	GSE12603	32365153	32365864	711	16638
hScc1	CdLS	GSE12603	32365153	32365909	756	16661
hScc1	G2	GSE9613	32365153	32365829	676	16621
p130	Senescent	GSE19898	32348859	32349334	475	226
p130	shRbSenescent	GSE19898	32348882	32349323	441	232

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	32250956	32251221	265	11780
Myc	K562	GSE19551	32246767	32247096	329	15937
TFAP2C	MCF7	GSE21234	32246742	32247163	421	15916
TFAP2C	MCF7	GSE21234	32259866	32260173	307	2849

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	CD4	GSE12889	32268389	32268566	177
CTCF	CD4	SISSRdata	32268389	32268566	177
CTCF	G2	GSE9613	32265559	32265724	165
CTCF	G2	GSE9613	32267664	32269367	1703
CTCF	G2	GSE9613	32287459	32287751	292
CTCF	G2	GSE9613	32329753	32330118	365
CTCF	G2	GSE9613	32336321	32336630	309
CTCF	G2	GSE9613	32347991	32349248	1257
ER	MCF7	GSE19013	32285321	32286401	1080
Gata2	K562	GSE18868	32321219	32321824	605
H3K4me2	HCT116	GSE10453	32347123	32347637	514
H3ac	HepG2	E	32347123	32348066	943
NFkBII	GM12892	GSE19485	32326567	32327526	959
NRSF	mAb	Jurkat	32267664	32268870	1206
Nanog	hES	GSE18292	32320335	32320951	616
Oct1	Hela	GSE14283	32295813	32295851	38
Oct1	Hela	GSE14283	32305865	32305904	39
Oct1	Hela	GSE14283	32331352	32331423	71
P300	T30-glioblastoma	GSE21026	32348016	32349587	1571
PHF8	HeLa	GSE20725	32347700	32349788	2088
PHF8	Hs68plusFBS	GSE20725	32347778	32349222	1444
TAF	Hela	GSE8489	32347123	32347991	868
USF2	HepG2	E	32269205	32269643	438
VDR	GM10855-stim	GSE22484	32339147	32340171	1024
VDR	GM10855-stim	GSE22484	32341400	32342851	1451
hScc1	Bcell	GSE12603	32267886	32268832	946
hScc1	Bcell	GSE12603	32347991	32349016	1025
hScc1	CdLS	GSE12603	32267886	32268699	813
hScc1	CdLS	GSE12603	32348414	32349284	870
hScc1	G2	GSE9613	32267886	32269205	1319
hScc1	G2	GSE9613	32347917	32349165	1248

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-1	hsa-mir-1-2	18	15685193
hsa-miR-1	hsa-mir-1-1	20	15685193
hsa-miR-124	hsa-mir-124-1	8	15685193
hsa-miR-124	hsa-mir-124-2	8	15685193
hsa-miR-124	hsa-mir-124-3	20	15685193
hsa-miR-373	hsa-mir-373	19	15685193
hsa-miR-373*	hsa-mir-373	19	15685193

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018