Annotation Detail for POU4F2
Basic Information Top
| Gene Symbol: | POU4F2 ( BRN3.2,BRN3B,Brn-3b ) |
|---|---|
| Gene Full Name: | POU class 4 homeobox 2 |
| Band: | 4q31.22 |
| Quick Links | Entrez ID:5458; OMIM: 113725; Uniprot ID:PO4F2_HUMAN; ENSEMBL ID: ENSG00000151615; HGNC ID: 9219 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 119 | POU-IV box. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 33 | O-linked | HMM predict |
| 33 | Phosphoserine(MAPK) | HMM predict |
| 46 | Phosphoserine(CDC2) | HMM predict |
| 46 | Phosphoserine(IKK) | HMM predict |
| 48 | Phosphoserine(CK1) | HMM predict |
| 50 | Phosphoserine(CK1) | HMM predict |
| 51 | Phosphoserine(IKK) | HMM predict |
| 75 | Phosphoserine(CK1) | HMM predict |
| 77 | Phosphoserine(CK1) | HMM predict |
| 79 | Phosphoserine(CK1) | HMM predict |
| 95 | Phosphothreonine(CDK) | HMM predict |
| 95 | Phosphothreonine(MAPK) | HMM predict |
| 135 | Phosphoserine(CDC2) | HMM predict |
| 152 | O-linked | HMM predict |
| 152 | O-linked | HMM predict |
| 153 | O-linked | HMM predict |
| 156 | O-linked | HMM predict |
| 159 | Phosphoserine(CK1) | HMM predict |
| 159 | Phosphoserine(IKK) | HMM predict |
| 159 | Phosphoserine(ATM) | HMM predict |
| 159 | O-linked | HMM predict |
| 215 | O-linked | HMM predict |
| 296 | Phosphoserine(ATM) | HMM predict |
| 351 | Phosphothreonine(PKA) | HMM predict |
| 352 | Phosphoserine(IKK) | HMM predict |
| 352 | Phosphoserine(PKA) | HMM predict |
| 398 | Arginine | HMM predict |
| 402 | Lysine | HMM predict |
- RefSeq ID: NM_004575
- Location:chr4 147779494-147783071
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 147777630 | 147778166 | 536 | 1597 |
| H3K27me3 | colorectal | cancer | 147772629 | 147775092 | 2463 | 5634 |
| H3K27me3 | colorectal | cancer | 147778082 | 147779031 | 949 | 938 |
| NRSF | Jurkat | GSE13047 | 147777428 | 147778125 | 697 | 1718 |
| NRSF | Jurkat | SISSRdata | 147777452 | 147777867 | 415 | 1835 |
| NRSF | mAb | Jurkat | 147769497 | 147770049 | 552 | 9722 |
| NRSF | mAb | Jurkat | 147772741 | 147775041 | 2300 | 5604 |
| NRSF | mAb | Jurkat | 147776088 | 147777630 | 1542 | 2636 |
| NRSF | mAb | Jurkat | 147778050 | 147778671 | 621 | 1134 |
| NRSF-mono | Jurkat | QuESTdata | 147777341 | 147778118 | 777 | 1765 |
| NRSF-poly | Jurkat | QuESTdata | 147777448 | 147778085 | 637 | 1728 |
| Rb | Quiescent | GSE19898 | 147777541 | 147777797 | 256 | 1826 |
| hScc1 | Bcell | GSE12603 | 147777558 | 147777857 | 299 | 1787 |
| hScc1 | Bcell | GSE12603 | 147778447 | 147778901 | 454 | 821 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 147795800 | 147796153 | 353 | 12905 |
| NRSF | Jurkat | GSE13047 | 147784189 | 147785221 | 1032 | 1634 |
| NRSF | Jurkat | SISSRdata | 147784336 | 147784818 | 482 | 1506 |
| NRSF | mAb | Jurkat | 147781112 | 147785756 | 4644 | 363 |
| NRSF | mAb | Jurkat | 147786044 | 147788277 | 2233 | 4089 |
| NRSF-mono | Jurkat | QuESTdata | 147784188 | 147785046 | 858 | 1546 |
| NRSF-poly | Jurkat | QuESTdata | 147783317 | 147783828 | 511 | 501 |
| NRSF-poly | Jurkat | QuESTdata | 147784274 | 147784896 | 622 | 1514 |
| hScc1 | Bcell | GSE12603 | 147795656 | 147796153 | 497 | 12833 |
| hScc1 | G2 | GSE9613 | 147795695 | 147796187 | 492 | 12870 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 147778867 | 147781249 | 2382 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-1 | hsa-mir-1-2 | 18 | 14697198 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 14697198 |
| hsa-miR-101 | hsa-mir-101-1 | 1 | 14697198 |
| hsa-miR-101 | hsa-mir-101-2 | 9 | 14697198 |
| hsa-miR-130a | hsa-mir-130a | 11 | 14697198 |
| hsa-miR-130a* | hsa-mir-130a | 11 | 14697198 |
| hsa-miR-19a | hsa-mir-19a | 13 | 14697198 |
| hsa-miR-19a* | hsa-mir-19a | 13 | 14697198 |
| hsa-miR-23a | hsa-mir-23a | 19 | 14697198 |
| hsa-miR-23a* | hsa-mir-23a | 19 | 14697198 |
| hsa-miR-23b | hsa-mir-23b | 9 | 14697198 |
| hsa-miR-23b* | hsa-mir-23b | 9 | 14697198 |
| hsa-miR-26a | hsa-mir-26a-1 | 3 | 14697198 |
| hsa-miR-26a | hsa-mir-26a-2 | 12 | 14697198 |
| hsa-miR-34a | hsa-mir-34a | 1 | 14697198 |
| hsa-miR-34a* | hsa-mir-34a | 1 | 14697198 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 557 | mRNA repression | TRUE | miR-23 | POU4F2 | in vitro reporter gene assay (Luciferase) | 14697198 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000151615 | n_a | n_a | n_a | n_a | n_a |
Cis-Nats regulation