Annotation Detail for PPARA
Basic Information Top
| Gene Symbol: | PPARA ( MGC2237,MGC2452,NR1C1,PPAR,PPARalpha,hPPAR ) |
|---|---|
| Gene Full Name: | peroxisome proliferator-activated receptor alpha |
| Band: | 22q13.31 |
| Quick Links | Entrez ID:5465; OMIM: 170998; Uniprot ID:PPARA_HUMAN; ENSEMBL ID: ENSG00000186951; HGNC ID: 9232 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 12 | Phosphoserine(MAPK) | HMM predict |
| 12 | Phosphoserine(CDC2) | HMM predict |
| 38 | Phosphoserine(ATM) | HMM predict |
| 73 | Phosphoserine(IKK) | HMM predict |
| 73 | Phosphoserine(ATM) | HMM predict |
| 76 | O-linked | HMM predict |
| 76 | O-linked | HMM predict |
| 77 | O-linked | HMM predict |
| 77 | Phosphoserine(CDC2) | HMM predict |
| 79 | Phosphoserine(CK1) | HMM predict |
| 79 | O-linked | HMM predict |
| 80 | Phosphoserine(IKK) | HMM predict |
| 82 | O-linked | HMM predict |
| 93 | Phosphoserine(CDK) | HMM predict |
| 234 | Phosphoserine(PKG) | HMM predict |
| 276 | S-palmitoyl | HMM predict |
| 464 | Phosphotyrosine(Syk) | HMM predict |
- RefSeq ID: NM_001001928
- Location:chr22 44925162-45018316
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 44905656 | 44906361 | 705 | 19154 |
| H3ac | HepG2 | E | 44922889 | 44923899 | 1010 | 1769 |
| STAT1 | IFN | SISSRdata | 44922862 | 44923620 | 758 | 1922 |
| USF1 | HepG2 | E | 44914755 | 44916383 | 1628 | 9594 |
| hScc1 | Bcell | GSE12603 | 44906660 | 44906795 | 135 | 18435 |
| hScc1 | Bcell | GSE12603 | 44908103 | 44908787 | 684 | 16718 |
| hScc1 | Bcell | GSE12603 | 44923930 | 44924873 | 943 | 761 |
| p63 | keratinocytes | GSE17611 | 44921904 | 44923334 | 1430 | 2544 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | Jurkat | GSE17954 | 45012792 | 45016573 | 3781 | 0 |
| ER | Breast-Cancer | GSE22609 | 44926095 | 44926644 | 549 | 0 |
| FOXA1 | MCF7 | GSE15244 | 44936751 | 44937906 | 1155 | 0 |
| Fos | K562 | GSE19551 | 44940473 | 44940868 | 395 | 0 |
| FoxA1 | MCF7 | MACSdata | 44953397 | 44953519 | 122 | 0 |
| Gata2 | K562 | GSE18868 | 45014335 | 45014743 | 408 | 0 |
| NRSF | mAb | Jurkat | 44929586 | 44929835 | 249 | 0 |
| Nanog | ES | GSE20650 | 44975861 | 44976441 | 580 | 0 |
| RARG | MCF7 | GSE15244 | 44968348 | 44968754 | 406 | 0 |
| hScc1 | CdLS | GSE12603 | 44925617 | 44926017 | 400 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7c | hsa-let-7c | 21 | 18006136 |
| hsa-let-7c | hsa-let-7c | 21 | 17690133 |
| hsa-let-7c | hsa-let-7c | 21 | 17438130 |
| hsa-let-7c* | hsa-let-7c | 21 | 18006136 |
| hsa-let-7c* | hsa-let-7c | 21 | 17690133 |
| hsa-let-7c* | hsa-let-7c | 21 | 17438130 |
| hsa-miR-103 | hsa-mir-103-2 | 20 | 19011694 |
| hsa-miR-103 | hsa-mir-103-1 | 5 | 19011694 |
| hsa-miR-10b | hsa-mir-10b | 2 | 19780876 |
| hsa-miR-10b* | hsa-mir-10b | 2 | 19780876 |
| hsa-miR-122 | hsa-mir-122 | 18 | 19487572 |
| hsa-miR-122* | hsa-mir-122 | 18 | 19487572 |
| hsa-miR-17 | hsa-mir-17 | 13 | 17438130 |
| hsa-miR-17* | hsa-mir-17 | 13 | 17438130 |
| hsa-miR-206 | hsa-mir-206 | 6 | 19074574 |
| hsa-miR-21 | hsa-mir-21 | 17 | 20693317 |
| hsa-miR-21* | hsa-mir-21 | 17 | 20693317 |
| hsa-miR-22 | hsa-mir-22 | 17 | 19011694 |
| hsa-miR-22 | hsa-mir-22 | 17 | 18347104 |
| hsa-miR-22* | hsa-mir-22 | 17 | 19011694 |
| hsa-miR-22* | hsa-mir-22 | 17 | 18347104 |
| hsa-miR-29a | hsa-mir-29a | 7 | 20164119 |
| hsa-miR-29a* | hsa-mir-29a | 7 | 20164119 |
| hsa-miR-29b | hsa-mir-29b-1 | 7 | 20164119 |
| hsa-miR-29b | hsa-mir-29b-2 | 1 | 20164119 |
| hsa-miR-29b-1* | hsa-mir-29b-1 | 7 | 20164119 |
| hsa-miR-29b-2* | hsa-mir-29b-2 | 1 | 20164119 |
| hsa-miR-29c | hsa-mir-29c | 1 | 20164119 |
| hsa-miR-29c* | hsa-mir-29c | 1 | 20164119 |
| hsa-miR-519d | hsa-mir-519d | 19 | 20057369 |
| hsa-miR-92a | hsa-mir-92a-1 | 13 | 17438130 |
| hsa-miR-92a | hsa-mir-92a-2 | X | 17438130 |
| No data |
| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17609 | mRNA | PPARA | chr22 | 44867017 | 44960172 | 1773 | mRNA | LOC150383 | chr22 | 44958399 | 44962140 | Sense/Antisense (SA) pairs |