AutismKB 2.0

Annotation Detail for RBFOX1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:RBFOX1 ( A2BP1,FOX-1,FOX1,HRNBP1 )
Gene Full Name: RNA binding protein, fox-1 homolog (C. elegans) 1
Band: 16p13.3
Quick LinksEntrez ID:54715; OMIM: 605104; Uniprot ID:RFOX1_HUMAN; ENSEMBL ID: ENSG00000078328; HGNC ID: 18222
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018723
  • Location:chr16 6009132-7700846
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF JurkatGSE13047 6006483 6007131 648 2326
NRSF mAbJurkat 6006865 6007999 1134 1701
NRSF-mono JurkatQuESTdata 6006488 6007124 636 2327
NRSF-poly JurkatQuESTdata 6006538 6006889 351 2419
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 6033124 6033333 209 0
CBP T0-glioblastomaGSE21026 6340449 6340669 220 0
CBP T0-glioblastomaGSE21026 6370012 6370835 823 0
CBP T0-glioblastomaGSE21026 6631739 6632007 268 0
CBP T30-glioblastomaGSE21026 6340162 6340644 482 0
CTCF CD4GSE12889 6633152 6633384 232 0
CTCF CD4GSE12889 7015714 7015855 141 0
CTCF CD4GSE12889 7217168 7217346 178 0
CTCF CD4SISSRdata 6633152 6633384 232 0
CTCF CD4SISSRdata 7015714 7015855 141 0
CTCF CD4SISSRdata 7217168 7217346 178 0
CTCF JurkatGSE12889 6633142 6633528 386 0
CTCF JurkatGSE12889 7015706 7015871 165 0
CTCF G2GSE9613 6008531 6010256 1725 0
CTCF G2GSE9613 6021150 6021476 326 0
CTCF G2GSE9613 6071411 6071591 180 0
CTCF G2GSE9613 6137141 6137366 225 0
CTCF G2GSE9613 6325197 6325450 253 0
CTCF G2GSE9613 6563605 6563951 346 0
CTCF G2GSE9613 6633137 6633522 385 0
CTCF G2GSE9613 6672152 6672390 238 0
CTCF G2GSE9613 6674064 6674456 392 0
CTCF G2GSE9613 7015548 7015940 392 0
CTCF G2GSE9613 7076972 7077164 192 0
CTCF G2GSE9613 7258281 7258682 401 0
ER E2-MCF7GSE14664 6085667 6085702 35 0
ER E2-MCF7GSE14664 6858989 6859033 44 0
ER E2-MCF7GSE14664 6979304 6979341 37 0
ER E2-MCF7GSE14664 7173094 7173133 39 0
ER Fulvestrant-MCF7GSE14664 6914190 6914230 40 0
FOXA1 MCF7GSE15244 7127655 7128518 863 0
Fos K562GSE19551 6677656 6677972 316 0
FoxA1 MCF7MACSdata 6289627 6289807 180 0
FoxA1 MCF7MACSdata 7128023 7128330 307 0
Myc hESGSE17917 7048838 7049218 380 0
NRSF JurkatGSE13047 6183439 6184492 1053 0
NRSF JurkatGSE13047 6531169 6531510 341 0
NRSF JurkatGSE13047 7003716 7005393 1677 0
NRSF JurkatGSE13047 7005997 7006407 410 0
NRSF JurkatGSE13047 7172226 7173270 1044 0
NRSF JurkatGSE13047 7236153 7237429 1276 0
NRSF JurkatSISSRdata 6183829 6184191 362 0
NRSF JurkatSISSRdata 6531169 6531510 341 0
NRSF mAbJurkat 6173543 6173871 328 0
NRSF mAbJurkat 6176093 6177476 1383 0
NRSF mAbJurkat 6180132 6181617 1485 0
NRSF mAbJurkat 6181854 6183302 1448 0
NRSF mAbJurkat 6183676 6185412 1736 0
NRSF mAbJurkat 6185753 6186027 274 0
NRSF mAbJurkat 6186500 6187599 1099 0
NRSF mAbJurkat 6190253 6190992 739 0
NRSF mAbJurkat 6779339 6779626 287 0
NRSF mAbJurkat 6999327 7000509 1182 0
NRSF mAbJurkat 7000878 7001155 277 0
NRSF mAbJurkat 7001814 7002750 936 0
NRSF mAbJurkat 7003972 7004187 215 0
NRSF mAbJurkat 7005031 7006349 1318 0
NRSF mAbJurkat 7006729 7008438 1709 0
NRSF mAbJurkat 7009219 7010095 876 0
NRSF mAbJurkat 7010574 7010819 245 0
NRSF mAbJurkat 7168258 7169011 753 0
NRSF mAbJurkat 7170403 7170836 433 0
NRSF mAbJurkat 7172179 7174794 2615 0
NRSF mAbJurkat 7175109 7176149 1040 0
NRSF mAbJurkat 7229530 7229676 146 0
NRSF mAbJurkat 7233922 7234916 994 0
NRSF mAbJurkat 7235436 7237762 2326 0
NRSF mAbJurkat 7238276 7240807 2531 0
NRSF mAbJurkat 7244288 7244506 218 0
NRSF-mono JurkatQuESTdata 6183438 6184340 902 0
NRSF-mono JurkatQuESTdata 6531256 6531509 253 0
NRSF-mono JurkatQuESTdata 7003190 7003611 421 0
NRSF-mono JurkatQuESTdata 7003893 7005149 1256 0
NRSF-mono JurkatQuESTdata 7172432 7173269 837 0
NRSF-mono JurkatQuESTdata 7236261 7237181 920 0
NRSF pAbJurkat 6183676 6185412 1736 0
NRSF pAbJurkat 7000156 7000509 353 0
NRSF pAbJurkat 7001814 7002750 936 0
NRSF pAbJurkat 7003972 7004187 215 0
NRSF pAbJurkat 7005031 7006349 1318 0
NRSF pAbJurkat 7006729 7007734 1005 0
NRSF pAbJurkat 7172179 7173055 876 0
NRSF pAbJurkat 7235761 7237762 2001 0
NRSF-poly JurkatQuESTdata 6183580 6184330 750 0
NRSF-poly JurkatQuESTdata 6531196 6531530 334 0
NRSF-poly JurkatQuESTdata 7003791 7004658 867 0
NRSF-poly JurkatQuESTdata 7005997 7006407 410 0
NRSF-poly JurkatQuESTdata 7172226 7173090 864 0
NRSF-poly JurkatQuESTdata 7236183 7237232 1049 0
Nanog ESGSE20650 6166289 6167073 784 0
Nanog hESGSE18292 6166455 6166682 227 0
Nanog hESGSE18292 6851089 6852024 935 0
Nanog hESGSE18292 6894656 6895151 495 0
Nanog hESGSE18292 6954665 6955021 356 0
Nanog hESGSE18292 7025531 7025953 422 0
Nanog hESGSE18292 7197668 7197825 157 0
Nanog hESGSE18292 7295391 7295633 242 0
Nanog hESGSE18292 7314378 7314779 401 0
Oct1 H2O2-HelaGSE14283 6204307 6204333 26 0
Oct1 H2O2-HelaGSE14283 7164363 7164389 26 0
Oct1 H2O2-HelaGSE14283 7211080 7211109 29 0
Oct1 H2O2-HelaGSE14283 7256813 7256842 29 0
Oct1 HelaGSE14283 6085666 6085701 35 0
Oct1 HelaGSE14283 6123456 6123505 49 0
Oct1 HelaGSE14283 6140052 6140083 31 0
Oct1 HelaGSE14283 6153507 6153546 39 0
Oct1 HelaGSE14283 6204307 6204333 26 0
Oct1 HelaGSE14283 6223537 6223591 54 0
Oct1 HelaGSE14283 6286118 6286184 66 0
Oct1 HelaGSE14283 6288367 6288414 47 0
Oct1 HelaGSE14283 6370953 6370981 28 0
Oct1 HelaGSE14283 6450880 6450910 30 0
Oct1 HelaGSE14283 6496222 6496252 30 0
Oct1 HelaGSE14283 6638517 6638583 66 0
Oct1 HelaGSE14283 6819957 6819986 29 0
Oct1 HelaGSE14283 6820351 6820396 45 0
Oct1 HelaGSE14283 6914191 6914231 40 0
Oct1 HelaGSE14283 7025778 7025812 34 0
Oct1 HelaGSE14283 7139119 7139147 28 0
Oct1 HelaGSE14283 7164359 7164391 32 0
Oct1 HelaGSE14283 7173089 7173129 40 0
Oct1 HelaGSE14283 7190322 7190355 33 0
Oct4 hESGSE17917 6851213 6851621 408 0
Oct4 hESGSE21916 6307954 6308398 444 0
P300 T0-glioblastomaGSE21026 6094943 6095634 691 0
P300 T0-glioblastomaGSE21026 6340451 6341004 553 0
P300 T0-glioblastomaGSE21026 6449808 6450199 391 0
P300 T30-glioblastomaGSE21026 6095074 6095623 549 0
P300 T30-glioblastomaGSE21026 6340232 6340649 417 0
P300 T30-glioblastomaGSE21026 6370265 6370460 195 0
Sox2 hESGSE18292 6894786 6895028 242 0
TAF HelaGSE8489 6100335 6100971 636 0
TAF HelaGSE8489 6357710 6358136 426 0
TAF HelaGSE8489 6363035 6363260 225 0
TAF HelaGSE8489 6579922 6580177 255 0
TAF HelaGSE8489 6779339 6779626 287 0
TAF HelaGSE8489 6812588 6812970 382 0
TAF HelaGSE8489 7156718 7156952 234 0
TFAP2C MCF7GSE21234 6916811 6917113 302 0
hScc1 BcellGSE12603 6009377 6009990 613 0
hScc1 BcellGSE12603 6539834 6540053 219 0
hScc1 BcellGSE12603 6632849 6633522 673 0
hScc1 BcellGSE12603 6674064 6674456 392 0
hScc1 CdLSGSE12603 6633028 6633597 569 0
hScc1 CdLSGSE12603 6674064 6674528 464 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved