AutismKB 2.0

Annotation Detail for GRAMD1C


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Basic Information Top
Gene Symbol:GRAMD1C ( DKFZp434C0328,DKFZp686K06117,FLJ35862,FLJ40464 )
Gene Full Name: GRAM domain containing 1C
Band: 3q13.31
Quick LinksEntrez ID:54762; OMIM: NA; Uniprot ID:GRM1C_HUMAN; ENSEMBL ID: ENSG00000178075; HGNC ID: 25252
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
532Phosphoserine (By similarity).
Location(AA) Modifications Resource
532Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
6Phosphothreonine(PKC)HMM predict
29N-linkedHMM predict
31Phosphoserine(CDC2)HMM predict
33Phosphothreonine(PKC)HMM predict
50N-linkedHMM predict
64Phosphotyrosine(Syk)HMM predict
128N-linkedHMM predict
220PhosphoserineHMM predict
220Phosphoserine(MAPK)HMM predict
220Phosphoserine(CDK)HMM predict
220Phosphoserine(CDC2)HMM predict
237Phosphoserine(CK1)HMM predict
255Phosphoserine(IKK)HMM predict
259N-linkedHMM predict
270Phosphoserine(ATM)HMM predict
276Phosphothreonine(PKC)HMM predict
289Phosphothreonine(PKC)HMM predict
303Phosphotyrosine(INSR)HMM predict
309Phosphoserine(IKK)HMM predict
311Phosphothreonine(PKC)HMM predict
312Phosphoserine(CK1)HMM predict
312Phosphoserine(CK2)HMM predict
314Phosphoserine(CK2)HMM predict
431Phosphotyrosine(Jak)HMM predict
431SulfotyrosineHMM predict
433SulfotyrosineHMM predict
517N-linkedHMM predict
532Phosphoserine(ATM)HMM predict
554N-linkedHMM predict
572N-linkedHMM predict
654N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017577
  • Location:chr3 115040369-115148709
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 115031886 115032843 957 8005
CTCF CD4GSE12889 115040183 115040514 331 21
CTCF CD4SISSRdata 115040183 115040514 331 21
CTCF HelaGSE12889 115040163 115040359 196 109
P300 T30-glioblastomaGSE21026 115031817 115032898 1081 8012
TFAP2C MCF7GSE21234 115040063 115040545 482 66
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 115046198 115046460 262 0
CTCF CD4GSE12889 115114454 115114740 286 0
CTCF CD4SISSRdata 115046198 115046460 262 0
CTCF CD4SISSRdata 115114454 115114740 286 0
CTCF G2GSE9613 115040141 115040703 562 0
CTCF G2GSE9613 115046170 115046568 398 0
CTCF G2GSE9613 115052095 115052290 195 0
CTCF G2GSE9613 115086470 115086766 296 0
CTCF G2GSE9613 115091581 115092046 465 0
CTCF G2GSE9613 115114505 115114750 245 0
FOXA1 MCF7GSE15244 115049382 115049593 211 0
FOXA1 MCF7GSE15244 115099039 115099330 291 0
Jun K562GSE19551 115114558 115114761 203 0
Nanog hESGSE18292 115114487 115114756 269 0
Oct1 H2O2-HelaGSE14283 115045423 115045476 53 0
Oct1 HelaGSE14283 115045436 115045475 39 0
Oct1 HelaGSE14283 115132436 115132516 80 0
PolII HeLaGSE12783 115039968 115041234 1266 0
STAT1 IFNSISSRdata 115114365 115114954 589 0
hScc1 BcellGSE12603 115040141 115040625 484 0
hScc1 BcellGSE12603 115086470 115086666 196 0
hScc1 BcellGSE12603 115114377 115114750 373 0
hScc1 CdLSGSE12603 115040141 115040625 484 0
hScc1 CdLSGSE12603 115114305 115115005 700 0
hScc1 G2GSE9613 115040141 115040793 652 0
hScc1 G2GSE9613 115114436 115114750 314 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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